Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2920 ATGTCCGTTAATCGAATCCTCAGCACAAATCATCATCAGGTCGACTTCTGGAGAATCCTGGGATTCCTGTCGAGTATCATTGGGCTGTCATCCTATCTTCTGAGTTCATCTTTCCATTCTATATTCGCAGAGTGGAACACTTGGAAAATTATTCTGTATATCTCTGTGAGTCTGATAATCGCCTACAGTATTTTGTTTGCCAAGACATGGAAACTTCCCTATCAGAATCTCCTTTTCAGATCTCACGTAGCATTTCTGGTCTTGTTCCTGACTTCAGTTTACTCTTTCTTCTATGACAAATGCGTGAAGAAAAACCCAGATGCGTTCAGTCTCATTTCTAGTGGTTCATTTGCTTTCATGTCTTTGAGCTTGTCATTTCAGAAGATTCAACTTGGATTCGAGGACGATCTTCTCAAATTTTTCCTGGGTTCTCTGGCTATCCAACTCATGAAGATCAACTTGTGTTTGTCTTTGGTCGGAGCAGCTCTCTGTTATTTCCCTATCGTTCTAGTTCCTTCTTACTTACATTATCAATCAGATCATACTGCTAGTAGCAGTATTTCTGTAAAGGTTGATACTTGTGCTTACGATCTCAGAAAACAATTGTGTTCGATTCTGGGGATTGAGAATGACAGAGAAACTCCGGAGAGATTCATTTATCCTTCAGATTTTGAATCTAAACTTAAAGACGCAATCGCTTCTGGGTTTGTTAAAGAGAGCTACGACGTTTTCATCACTTGGCGAAAACAGGTCTTAGACGACAAGCTGTTGATCAGTACGACGACGGCGTTTCAGATGCTCGTGGTCAGCATCGAGGAGGTTCATCACAGGCTGCCGTTGAAATATCTCAGAGACGACATAGAAGAATGGGCGAAGGCTTGTAACGTCGTCCTTAAGACGTTGTTTCCCAATGAACGACATGCGTGTCATGTCGTCTTCTCGGGACTCTCTCCTCTGGACGATCTGTCTTTCACGGAGGTTTGTCGGGGGATAGGGACACAACTATTGAATTACGCCGGCGCCGTTTCGAGGACGACGCAGTCGCCGGAGCGTTTGTTCAGAATCGTAGACGTTTTAGAGACATTGGAAGAGATTTTGCCCAACATGGAGTCACTGTTCTGCAATCAACATTGTAAATTTCTCTACGATGAAGCCATTACAGTGTGTAAAAGGCTGGAAGAAGCAATCAGGGGTGTTTTCATGGAGCTCGAGAATCTGATTCGTCAAGATCCAGCAAAGGAGCTAGCAGTCGCCGGAGGTGGGCTTCATCCGACAAACCGTTATGTGATGAATTACCTGAGAGCTGCTTGTGAGCGTCGGAAAACACTCGATAAAGTTTTCGACGACAACCAAGTTTCGTCCTCGTCGTCCTCTTCTTTATCTAAGCAAATAGTTCAGATTGTGGAGTTGTTGGAAACTAATCTGGAGGCTAACTCCAAGATTTACAATAACAACGACTCAGCTTTGTGCTCTTTCTTCATGATGAACAACGTTAGGTACATAGTTCACGAGGCCAAAAATAGTAACATGGCAGACCTGTTAGGTGACGAGTGGATGCAGGAAAAAGTGTTAAAAGTGAGACACTACCTTGTTAGTTACCAGAGAAGTTCATGGGACAAAGTGCTTGAACTGTTAAACATTATGGATTATTATGACTCACATAATATTGTCGAATCCCATCATGCCAGAGAGAAGCTTGAGCTCTTTAAGTTGCAGTTTGAGGAGATATGTGAAAACCAGTCTTCATGGGTTATCTTTGATGATCAACTGAGAAATGTCATTACGAGTTCTTTGATGAAAATTATGTTGCTTGCGTACGAGAATTTCATGATCACGTTCCTAAATGATCATGTCGAAACTGGAGATTTTGGAGTCCAAGTTATAGAGGGTCTTGTAAACAAGCTGTTTCTCGGAAAAAATGAGCACACCGTAAAATCCAAAAATATTCAACCAACATGGACAGTGGTGTTACCGGGTACAAAAGATTTTCATGAGTGGGGGAAGTATGGTGAGAAGACAATCCCCAATTTGACACACCCAAGAAAATACTATAGGTGCATATACAAGAATGATCAAGGTTGTGGAGCCAGAAAACATGTTCAACAAATACAGGAAAATCCAAAGATGTACAAGACTTGCTACTTTGGCTTCCATACATGCACTTTGCTTCTAAAGGCTAATCTTCAACGTTGA 2193 0.42 MSVNRILSTNHHQVDFWRILGFLSSIIGLSSYLLSSSFHSIFAEWNTWKIILYISVSLIIAYSILFAKTWKLPYQNLLFRSHVAFLVLFLTSVYSFFYDKCVKKNPDAFSLISSGSFAFMSLSLSFQKIQLGFEDDLLKFFLGSLAIQLMKINLCLSLVGAALCYFPIVLVPSYLHYQSDHTASSSISVKVDTCAYDLRKQLCSILGIENDRETPERFIYPSDFESKLKDAIASGFVKESYDVFITWRKQVLDDKLLISTTTAFQMLVVSIEEVHHRLPLKYLRDDIEEWAKACNVVLKTLFPNERHACHVVFSGLSPLDDLSFTEVCRGIGTQLLNYAGAVSRTTQSPERLFRIVDVLETLEEILPNMESLFCNQHCKFLYDEAITVCKRLEEAIRGVFMELENLIRQDPAKELAVAGGGLHPTNRYVMNYLRAACERRKTLDKVFDDNQVSSSSSSSLSKQIVQIVELLETNLEANSKIYNNNDSALCSFFMMNNVRYIVHEAKNSNMADLLGDEWMQEKVLKVRHYLVSYQRSSWDKVLELLNIMDYYDSHNIVESHHAREKLELFKLQFEEICENQSSWVIFDDQLRNVITSSLMKIMLLAYENFMITFLNDHVETGDFGVQVIEGLVNKLFLGKNEHTVKSKNIQPTWTVVLPGTKDFHEWGKYGEKTIPNLTHPRKYYRCIYKNDQGCGARKHVQQIQENPKMYKTCYFGFHTCTLLLKANLQR 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2920 730 Pfam WRKY DNA -binding domain 662 720 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g2920 730 SMART WRKY_cls 660 722 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g2920 730 Gene3D Exocyst complex component Exo70 175 643 - -
Prci2g2920 730 Coils Coil 389 409 - -
Prci2g2920 730 ProSiteProfiles WRKY domain profile. 662 718 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g2920 730 PANTHER EXOCYST COMPLEX PROTEIN EXO70 220 636 IPR004140 GO:0000145|GO:0006887
Prci2g2920 730 SUPERFAMILY WRKY DNA-binding domain 660 721 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci2g2920 730 Pfam Exo70 exocyst complex subunit 289 612 IPR046364 GO:0000145|GO:0005546|GO:0006887
Prci2g2920 730 SUPERFAMILY Cullin repeat-like 219 636 IPR016159 -
Prci2g2920 730 Gene3D WRKY domain 644 715 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2920 Prci-Chr2 35101087 35105981 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2920 222 638 EXO70 exocyst subunit family AT5G58430 46.698 1.36e-115 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci2g2920 Exo70 1.4e-80 CL0295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2920 K07195 - pcin:129304004 1431.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g2920 2 35101087 35105981 Prci2g2920 2 35101087 35105981 ECH