Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2918 ATGGCAATTCCCACCCGCCTAATTCATCCTCAGCTATGGAGATTTCTGGGTTTCTTTTCAAGCCTTGTGGGTCTTCTCTGTTATGCTCTGAGTTCCTCTTTCCACCAACTATTTGGTGACTGGAACTTCTTCAAGCTCATAATTTACAGTGTGGTAAGTCTATCCATAACCAGCTTGTTCTTATTTCCCAAGAAACGCAGACTCTCAAGAAGTTTCTTGCTCAAAGTTCATTTAGGTTTCTTGGTTCTGATGCTCACTACTTTCTACTCTTTCTTCTACGACAAAGCTGTCAAAGGAAAAAAACCAGACCTATTCAGCTTGATTTCATGTGCTTCCTTTGCTTTAATGTCCTTGAGCTTATCAAAACAGACCAACCTCGGATTCGAAGGCGATCTTCTGAATTTTTTCCTAGGTTGTCTCACTGTACAAATGATGAAAGTCCACTTGATGCTGGGCTTCATAGCTGCCATTTTTTGCTATTTCATCATTGTTCTTCGATCTCGTCGTTCTAGTACTGAATCACAAACAAGAGCCATTCAAGCTCATGAACAAGACCAATCTCAGTCACAGTTAGTACTGGAAATTGATACTACCGTAAGAGAAACTGATAACAGTAGTGATCATCAATCACAAACACTACTAAGAAGAAGATCTGATGATGATGGGTACAAATGGAAGAAATACGAAGTCAAACAAGTGAAAGGAAGTGAAAAGCAAATGAGTTTCTACAAATGCTCAATCCCAAGTTGCCCTATAAGGAAGAGAATTGAGAGGCATTTGGATGGGAAAGTTACTGAGGCAGTTTATAACGGTACTCATAACCATCATAAGCCTAGGGTTACAATAGAGAGAAACTCATCGTTTGAAACTCTTTATGCAAACCAACCTTTATTGAAAGCTTTGCTCTCTGATGAAACCCCATATCAACCATTGGAGACTCGTGACGAGGAACGACTCGATCTCGTCGACTCGCCGGAGAACTCGTCAATATCAGTATGA 999 0.4034 MAIPTRLIHPQLWRFLGFFSSLVGLLCYALSSSFHQLFGDWNFFKLIIYSVVSLSITSLFLFPKKRRLSRSFLLKVHLGFLVLMLTTFYSFFYDKAVKGKKPDLFSLISCASFALMSLSLSKQTNLGFEGDLLNFFLGCLTVQMMKVHLMLGFIAAIFCYFIIVLRSRRSSTESQTRAIQAHEQDQSQSQLVLEIDTTVRETDNSSDHQSQTLLRRRSDDDGYKWKKYEVKQVKGSEKQMSFYKCSIPSCPIRKRIERHLDGKVTEAVYNGTHNHHKPRVTIERNSSFETLYANQPLLKALLSDETPYQPLETRDEERLDLVDSPENSSISV 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2918 332 SMART WRKY_cls 219 277 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g2918 332 SUPERFAMILY WRKY DNA-binding domain 215 278 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci2g2918 332 ProSiteProfiles WRKY domain profile. 220 278 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g2918 332 Gene3D WRKY domain 204 279 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci2g2918 332 MobiDBLite consensus disorder prediction 311 332 - -
Prci2g2918 332 Pfam WRKY DNA -binding domain 220 275 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g2918 332 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 180 283 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2918 Prci-Chr2 34997196 34998194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2918 220 305 WRKY Transcription Factor Family AT2G03340 37.500 1.07e-13 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci2g2918 WRKY 7.4e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2918 - - pcin:129302720 649.432