Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2884 ATGGAGAATAAACCAAATATATTAATGCAAAGATATGAATTAGGAAGGTTACTGGGCCAAGGTACCTTTGGAAAGGTATACTACGCCCGCAGTACAATAACTAACCAGAGTGTAGCTATTAAAGTGATAAACAAGGACAGGGTTATGAAATCTGGACAAGCCGAACAGATCAAGAGGGAAATATTTGTAATGAGACTTGTTAAACATCCCAATATTATACAGCTTTATGAGGTTATGGCCACCAAAAGTAAGATTTACTTTGTTATCGAATATGCTAAAGGCGGTGAGCTCTTTGACAAGGTGGCCAAAGGAAAGCTCAAAGAAGATGTGGCACATAAATATTTTCAGCAGCTAGTGAATGCCGTAGACTTTTGTCATGGTAGAGGTGTATACCACCGTGACATAAAGCCAGAGAACCTTTTGTTGGATGAAAATGGGAACCTAAAGGTTTCTGATTTCGGATTAAGTGCTTTAGCTGATTCTAAGAGACAGGATGGCCTACTACATACACCTTGTGGCACGCCTGCCTACGTTGCTCCTGAACTCATCAAAAGGAAAGGTTATGATGGTGCCACAGCTGATACTTGGTCATGTGGAGTAGTTTTGTTTGTCTTACTAGCAGGTTATCATCCTTTTCATGATTCAAATTTGATAATGATGTATAGGAAGATTTCCAAAGCAGACTATAAGTTCCCTAGTTGGTTCTCCCCAGAAGTACGTAGACTGTTAATGAAGGTTTTGGATCCAGATCCTGATACTAGAATCTCCCTAGCTAAGATTAAGGAATCTTCTTGGTTTATGAAAGGGCCATTTTCTAGAGAAAAGAAATCTGAATGCGCGAACAAGGGTGTCTCAACATCAGGTGTGAAGCCTTGTGATCAAACCGATGAAAGTGATAGTATAGCAGCAGAAGCAGAAGCAATGCGACAGTCAGTTGTGCCCACAAGTATAAATGCTTTTGACATCATCTCACGTTCTAAAGGTTTTGATCTATCTGGATTCTTTGAAGATAGTTTCAAGAAGAGAGAAGCCAGATTTTCTTCGAGGCAACCAGCCTCAGTCATTATCTCTAAGCTGGAAGAAATCGCTAAGCGTCTGAAGCTGAAAATAAAGAAAAGAGATGCAGGTATGTTGAAATTAGATAGCCTCAAGGAAGGTAGAAAAGGGATTCTATGCATCGAGGCGGAGATCCTTGAGGCGACTCCAGTTTTCCATTTGGTTGAGATGAAAAAATCGAATGGAGATACATTGGAATATCAGAGCATATTGAAAGAGGAAATTAGGCCTGCTCTTAAGGATATTGTTTGGGTTTGGCAAGGGGACCAGCAACTACAATCACAACCATCAGAGGACCAGATACAGATGCATGACCAGCCAGTGACAACATCCACATCTATAGCGCATTCGTAA 1410 0.4057 MENKPNILMQRYELGRLLGQGTFGKVYYARSTITNQSVAIKVINKDRVMKSGQAEQIKREIFVMRLVKHPNIIQLYEVMATKSKIYFVIEYAKGGELFDKVAKGKLKEDVAHKYFQQLVNAVDFCHGRGVYHRDIKPENLLLDENGNLKVSDFGLSALADSKRQDGLLHTPCGTPAYVAPELIKRKGYDGATADTWSCGVVLFVLLAGYHPFHDSNLIMMYRKISKADYKFPSWFSPEVRRLLMKVLDPDPDTRISLAKIKESSWFMKGPFSREKKSECANKGVSTSGVKPCDQTDESDSIAAEAEAMRQSVVPTSINAFDIISRSKGFDLSGFFEDSFKKREARFSSRQPASVIISKLEEIAKRLKLKIKKRDAGMLKLDSLKEGRKGILCIEAEILEATPVFHLVEMKKSNGDTLEYQSILKEEIRPALKDIVWVWQGDQQLQSQPSEDQIQMHDQPVTTSTSIAHS 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2884 469 Pfam NAF domain 314 372 IPR004041 GO:0007165
Prci2g2884 469 FunFam Non-specific serine/threonine protein kinase 312 436 - -
Prci2g2884 469 FunFam Non-specific serine/threonine protein kinase 6 306 - -
Prci2g2884 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Prci2g2884 469 Gene3D Phosphorylase Kinase; domain 1 6 98 - -
Prci2g2884 469 CDD CIPK_C 318 432 - -
Prci2g2884 469 SUPERFAMILY Protein kinase-like (PK-like) 8 267 IPR011009 -
Prci2g2884 469 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2884 469 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2884 469 ProSiteProfiles NAF domain profile. 312 336 IPR018451 GO:0007165
Prci2g2884 469 Gene3D Kinase associated domain 1, KA1 315 437 - -
Prci2g2884 469 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Prci2g2884 469 ProSitePatterns Protein kinases ATP-binding region signature. 18 50 IPR017441 GO:0005524
Prci2g2884 469 MobiDBLite consensus disorder prediction 447 469 - -
Prci2g2884 469 Gene3D Transferase(Phosphotransferase) domain 1 99 314 - -
Prci2g2884 469 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 432 - -
Prci2g2884 469 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2884 Prci-Chr2 33642743 33648666 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2884 1 442 CBL-interacting serine-threonine protein kinases AT5G58380 66.228 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Prci2g2884 Pkinase 4.4e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2884 - - gmx:100790905 681.404