Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2881 ATGGAGCGAGAGATCGAACCTGTGATGGATCACGCCTATTCTTTGTTCGGAAAATATGAACTCGGAAAGCTTCTGGGTTGTGGTGCCTTCGCTAAGGTCTACCATGGCCGCAACCTTCAAACATCCCAGAGCGTCGCCATTAAAGTCTTCAACAAGAAGAAGATCACCGCCTCCGGCCTCACCTCCAACATCGTGCGTGAGATCACCATCACGAGCCAGCTTCGTCATGCCCATATCGTCAGGTTCCACGAAGTCCTCGCCACCAAGACCAAGATTTTCTTCGTCATTGAACTGGTTAAAGGTGGCGAGTTATTCTCCAAAATCGCCAAGGGACGATTTTCTGAGGATCTCAGCCGGAGATATTTCCAGCAGTTGATCTCCGCCGTTGGGTACTGCCACTGCCGGGGTGTCTTCCACCGCGACTTGAAGCCGGAGAATCTTCTCCTCGACGACAATGGCGGCCTCAAAGTTTCGGATTTCGGGTTGAGCGCTGGCAGGGATCAGATCCGACCTGATGGGTTGCTTCATACGCTCTGCGGCACCCCTGCCTACGTGGCGCCGGAGGTTCTATCCAAGAAAGGGTACGAAGGGGCGAAGGCGGACGTGTGGTCTTGCGGCGTCATTCTCTTCGCGTTGGCCGCCGGGTACTTACCCTTCAACGACCCGAATCTCATGGTGATGTACAGGAAGATTCAAAAGGGAGAATTCCAGTGTCCGAGATGGATTTCGCCGGAGCTAAGGAGGTTCCTTTCGCGGTTGCTTGACACGAATCCGAATACCCGAATCACCATCAGTGAGATCCATCAGGATCCGTGGTTCAAGAAAGGGTATAACGAGGTAAGGTTCCAGGAGGATGATTTCGGGTTCGGGTCGAAGAACAATGGAGAGACGACGTCGGACATAATCCAACTGAATGCGTTTGATATCATATCCTTCTCTTCAGGGTTGGACCTGTCCGGAATGTTCTACAACACGGCAGGGAGAAGCGAGAGGTTTGTGTTGGTGGAGTCGCCGGAGAAGATAATAGAAAAAGTGGAGAAGTTGGCGAAGGCGGAGGGGCTGGCTGTGAGGAGGAGGAAGGAGGAGTGCAAGGTAGTGGTGGAAGGAGTGAAGGGCAATTTGGGAATTTCGGTAGAAGTTTACCGGTTGACAGGTCAGCTGGTGGTGGTTGAGGCTACGAGATGCATAAACGGTGTCGTTTTCATGGAGCGGTTTTGGAACAACAGGTTAAAGCCCTTACTCCGCAATCCCACTGGAACCACTAGTACGACGTCGAATCAGGGATTTGACCAAAGGCCCGTCGAAGGCAAAAATCTCCTCCATGTTGATAGCAGAAAATACAAAAGCTTAATAATTAATTGA 1362 0.5162 MEREIEPVMDHAYSLFGKYELGKLLGCGAFAKVYHGRNLQTSQSVAIKVFNKKKITASGLTSNIVREITITSQLRHAHIVRFHEVLATKTKIFFVIELVKGGELFSKIAKGRFSEDLSRRYFQQLISAVGYCHCRGVFHRDLKPENLLLDDNGGLKVSDFGLSAGRDQIRPDGLLHTLCGTPAYVAPEVLSKKGYEGAKADVWSCGVILFALAAGYLPFNDPNLMVMYRKIQKGEFQCPRWISPELRRFLSRLLDTNPNTRITISEIHQDPWFKKGYNEVRFQEDDFGFGSKNNGETTSDIIQLNAFDIISFSSGLDLSGMFYNTAGRSERFVLVESPEKIIEKVEKLAKAEGLAVRRRKEECKVVVEGVKGNLGISVEVYRLTGQLVVVEATRCINGVVFMERFWNNRLKPLLRNPTGTTSTTSNQGFDQRPVEGKNLLHVDSRKYKSLIIN 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2881 453 FunFam Aurora kinase A 13 102 - -
Prci2g2881 453 Gene3D Transferase(Phosphotransferase) domain 1 101 280 - -
Prci2g2881 453 FunFam Non-specific serine/threonine protein kinase 9 301 - -
Prci2g2881 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Prci2g2881 453 SUPERFAMILY Protein kinase-like (PK-like) 16 283 IPR011009 -
Prci2g2881 453 Gene3D Kinase associated domain 1, KA1 300 417 - -
Prci2g2881 453 Gene3D Phosphorylase Kinase; domain 1 16 100 - -
Prci2g2881 453 ProSiteProfiles Protein kinase domain profile. 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2881 453 SMART serkin_6 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2881 453 CDD CIPK_C 305 415 - -
Prci2g2881 453 Pfam Protein kinase domain 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2881 453 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 15 394 - -
Prci2g2881 453 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Prci2g2881 453 Pfam NAF domain 303 357 IPR004041 GO:0007165
Prci2g2881 453 ProSiteProfiles NAF domain profile. 299 323 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2881 Prci-Chr2 33592095 33593878 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2881 10 425 CBL-interacting serine-threonine protein kinases AT2G30360 60.613 0.0 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Prci2g2881 Pkinase 3.8e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2881 - - qsa:O6P43_014145 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g2240 13 37084264 37086863 Prci2g2881 2 33592095 33593878 CCT