Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2871 ATGGGTAATCACAGGTTCAGATTTTCTGATATGATACCAAATGCTTGGTTTTACAAGCTCAAAGACATGAGCAGATCAAGAAAGAAGAAGAACAAGGCAGGTTCAGTGGCAACATCTCAGAGATTGCAGCCAAGGTGTTCGAATTATTTCCCCAGTGAAATTAGTAGAACTGGTAAGTTATACAATTCACCCATTTTCAGTACAAGAGCTTCTGAGCTTGCTTTCATTGATTCACCAAGAAGGTCTTCCAAGAGAAGAGCTCGGAGAAGAACAGTTTATTACAAGCCTTCTTCTCCCACACTTGCTTCTTCCCCTGTGTCTGCAACTTCTATCGATCATTCCACAAATAAAAATAATTGGGCTCACCCCAGTCAAGCTAAGTCTCCTGATTACTATATCTCCTCCGTTGAGATTTCTTCTGAGTCAGACCTCAATGGTGATCTTGTTTCATCTGAATCTGAATGTGATGATGATAGTTTTGCTGCTTCTGCTCCTCCTCATCCTGGCATGTTCAACGGACTACCCTCAAATTGCAGCTGTAGAGTAAGTTCTTCAACAAATGACATCATCATCGACATGAACAATGAAGATTCTGAGAAGCTAGATCGGTTTAAAACAATTTCAGAGTTGGATCTTCCTCCAATATTAACAAAGCCGTTAAAGTTTGAAGATGATGATGATGATGAGAAGGTCATTAAGGCCACTGAATTGAGAAGTTCATCCAAGTCAGACAAGCCTAAAGGTCATCACCAGTCACAATCTGTCAACAATGGCAAGAAAGAGAGCATTAGAACTCAAAGAGATCGAAGATCAAGCCATAGTAATGCTCGAAAGTCTTCTGTTAATTCATCTACAGGAATCAGACTCAGAGTGAATTCTCCAAAGCTAGCAAGCAGAAAGACCGTTCAAGCTGCTTCTGCAAGAAGGGGTGTGTCAAGCAACAATAAAGCCTCTTCATGGAAAAATGCAGGATTTCCTGAGGGTTTTGCAGTTGTGAAGTCGTCATTTGATCCACAGAGAGACTTCAGAGATTCAATGTTGGAGATGATTATGGAGAACAACATCAGGGCATCAAAGGATTTAGAAGATTTACTTGCATGCTATCTTTCACTGAACTCCAGTGAATACCACGAGCTCATTGTCAAAGCATTTGAACAAACCTGGCTTGACATGGCTCAACTCAAATTGGGGGAAATTAAAACAGTGTCATGCCAAAAGCTAAGGGCTGGTACTATTCAGAATTGA 1245 0.4072 MGNHRFRFSDMIPNAWFYKLKDMSRSRKKKNKAGSVATSQRLQPRCSNYFPSEISRTGKLYNSPIFSTRASELAFIDSPRRSSKRRARRRTVYYKPSSPTLASSPVSATSIDHSTNKNNWAHPSQAKSPDYYISSVEISSESDLNGDLVSSESECDDDSFAASAPPHPGMFNGLPSNCSCRVSSSTNDIIIDMNNEDSEKLDRFKTISELDLPPILTKPLKFEDDDDDEKVIKATELRSSSKSDKPKGHHQSQSVNNGKKESIRTQRDRRSSHSNARKSSVNSSTGIRLRVNSPKLASRKTVQAASARRGVSSNNKASSWKNAGFPEGFAVVKSSFDPQRDFRDSMLEMIMENNIRASKDLEDLLACYLSLNSSEYHELIVKAFEQTWLDMAQLKLGEIKTVSCQKLRAGTIQN 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2871 414 ProSiteProfiles OVATE domain profile. 331 390 IPR006458 -
Prci2g2871 414 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 236 391 IPR038933 GO:0045892
Prci2g2871 414 Pfam Transcriptional repressor, ovate 335 391 IPR006458 -
Prci2g2871 414 MobiDBLite consensus disorder prediction 236 319 - -
Prci2g2871 414 Pfam DNA-binding domain 1 37 IPR025830 GO:0003677
Prci2g2871 414 MobiDBLite consensus disorder prediction 96 127 - -
Prci2g2871 414 MobiDBLite consensus disorder prediction 77 127 - -
Prci2g2871 414 MobiDBLite consensus disorder prediction 143 168 - -
Prci2g2871 414 NCBIfam uncharacterized plant-specific domain TIGR01568 329 391 IPR006458 -
Prci2g2871 414 MobiDBLite consensus disorder prediction 261 275 - -
Prci2g2871 414 MobiDBLite consensus disorder prediction 276 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2871 Prci-Chr2 33502043 33520118 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Prci2g2871 Ovate 8.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2871 - - pcin:129302013 796.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g0497 8 3222598 3224397 Prci2g2871 2 33502043 33520118 CCT