Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2848 ATGGTTGCCGTCAAGAAAACCAAGACGATCCATGAGAGCATCAACAACAGACTTGCTGTGGTGATGAGGAGTGGGAAATACACTTTGGGTTATAAAACGGTTCTGAAAACCCTTAGGAACTCTAAAGGGAAACTGGTTATCATTGCCAACAATTGCCCACGTTTAAGGAAATCAGAGATAGAGTATTGTGCAATGCTTGCCAAAGTGGGCGTGCATCACTACAATGGAAACAACGTTGATTTGGGCACAGCATGCGCCAAATATTTCCGGGTTTGCTGTCTTAGCATTATCGATCCTGGTGATTCTGATATTGTCAAGACAATGCCTGGTGAACAGTGA 339 0.4366 MVAVKKTKTIHESINNRLAVVMRSGKYTLGYKTVLKTLRNSKGKLVIIANNCPRLRKSEIEYCAMLAKVGVHHYNGNNVDLGTACAKYFRVCCLSIIDPGDSDIVKTMPGEQ 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2848 112 Gene3D - 2 108 IPR029064 -
Prci2g2848 112 FunFam 60S ribosomal protein L30 2 108 - -
Prci2g2848 112 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 13 105 IPR004038 -
Prci2g2848 112 ProSitePatterns Ribosomal protein L30e signature 1. 24 48 IPR022991 -
Prci2g2848 112 PANTHER RIBOSOMAL PROTEIN L30 1 110 IPR039109 GO:0003723
Prci2g2848 112 SUPERFAMILY L30e-like 13 106 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2848 Prci-Chr2 32680377 32682793 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2848 1 112 Cytoplasmic Ribosomal Protein Gene Family AT1G36240 77.679 6.29e-65 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2848 K02908 - sly:101254162 208.764