Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2821 ATGGCTGGGATTGATGATAATGTTACTTTAATTAGCGACTGGGGTCCTCCTACTCCGAGTCCGAGAACGTTTTTCTCTAAGATGCTTGGTGAAGATAATCTTACAAGACAAATCTCAGAGCCTCCTGGAAGTGGTAGTAGAACTGGGGAGTCCTTTCTGCGAAATGAAGAGCTCATTATGACTGGAAATTTCAACACAAGAGATAGAGCACCACCACAAGATGATGCTTCTGGTGGCCAATTAACTGACTCAACTTCTTTGTCTGACAATAAGTCTAGCTCACGAGGAAACCTGGTTGAAAGGATGGCTGCTAGAGCTGGATTTAATGCCCCAAGGTTGAATACTGAAAGCATTAGATCAGCTGATCCTACACTTAATTTAGATGCTCGATCTGCTTACTTTACCATACCGCCTGGCCTCAGTCCCACCTCACTTTTGGAGTCGCCGGTGTTCCTTTCTAATTCGCTGGCACAACCGTCTCCAACCACCGGAAAGTTTCCATTTATTGCAAATGGCAACTTCCGTGGCTCAGAACCAAACTCTGGTTCTCCTGAAAAATCTAAAGATAACGACTTTGATGACATCTATGCATCATCGTTTGCTTTCAAGACTACAACAGATTTGGGCTCTTTCTATAATGATGCTTCTACAAAAATTAATCCAACCACGCTGCCAGAACAGTATCTTACTGTGGAGGTTTCGGGCTCAGCTCCTGACTTTACTGACTCTCCGAGTCAAAATGATAATAAAGCATCCGTTGAGGAGCCAGCAGATGAAGAAGGAGATCAAAGAGGAAATGGAGACTCCCCGGCTGCTGGTGCTGGGGGCACACCATCTGAGGATGGTTATAACTGGAGAAAATATGGACAAAAACATGTTAAAGGTAGTGAGTTTCCACGAAGTTACTACAAATGCACGAATACAAATTGTCCGGTAAAGAAGAAAGTGGAAAGATCTCACGAGGGCCACATAACAGAAATCATCTACAAGGGAAATCACAACCATCCAAAACCTCCCACAAATCGCAGATCTGCAATAGGGTCTGTCAACAACCCTCTCAGTGACATGCAAGCAGACATATCCGAAAGTGCTGAACCACAGGGTGGGGGTGATGGTGAACTGGGCTGGGCAAGCACACAAAAAGGGAATATAGCTAGAAATAATACTGATTGGAAGTATGAGAACCCTGAAGTGACCTCACCAGCAGCAGCATCTGTAGGCCCTGAATTCTGCAACCAGTCCACCAATTTGCTGGGTCAGAATGGTGCTCGATTTGAATCAGGAGACGCAGTGGATGCCTCATCTACTTTCTCTAACGATGAGGATGATGATGATAGGGGTACTCATGGCAGTGTATCAGCAGGATATGAAGGAGAAGGAGATGAATCAGAGTCTAAAAGAAGAAAACTGGAATCTTATCCAAATACGGCAGAATTGAGTGGAGCCACGAGAGCTATTCGGGAGCCTAGAGTAGTTGTTCAAACTACCAGCGAAGTAGATATTCTTGATGATGGATATCGTTGGCGAAAATACGGACAAAAAGTTGTCAAAGGAAATCCCAATCCCAGGAGTTACTATAAGTGCACCAATGTTGGTTGCACAGTAAGGAAGCATGTAGAGAGAGCATCCCATGACCTAAAATCTGTGATCACTACTTATGAAGGAAAGCACAATCACGATGTTCCTGCAGCCCGCAATAGCAATCAAGGCAATGCTGCAGCTTCTAGTGCTGCTGCTCAAGCAACTTCTGTTATTCATGGCCACAGGGCTGAAGCTCCACAGGTTCATAACGGTATTGGAAGGCTTGATAGGCCTGCTTTGGGCCTGCGCTCGTTTAGCTTACCTGGGGCTGGGCCTGGTCCTGGGAGGCCACAGCTAGGGCATGGGGGCTTTTCATTTGGAATTGGAATGAACCAATCAGGTTTCCCCAATCTAGCAACTGTGGCAGCTTTGGGCCCGGCCCATGCTAAACTTCCCATTATGCCTGTTCATCCATTCTTGCCACATCAATGTCCACCAAATGAAATGGGCTTTATGTTGCCCAAAGGAGAGCCCAATTTGGATCCCATTCCAGACCGCGGGGTTAGCATACCCGCTGGTTCATCAGTATATCAAGATATAATGAGTCGGATGCCACTTGGACCTCATATGTAA 2154 0.4582 MAGIDDNVTLISDWGPPTPSPRTFFSKMLGEDNLTRQISEPPGSGSRTGESFLRNEELIMTGNFNTRDRAPPQDDASGGQLTDSTSLSDNKSSSRGNLVERMAARAGFNAPRLNTESIRSADPTLNLDARSAYFTIPPGLSPTSLLESPVFLSNSLAQPSPTTGKFPFIANGNFRGSEPNSGSPEKSKDNDFDDIYASSFAFKTTTDLGSFYNDASTKINPTTLPEQYLTVEVSGSAPDFTDSPSQNDNKASVEEPADEEGDQRGNGDSPAAGAGGTPSEDGYNWRKYGQKHVKGSEFPRSYYKCTNTNCPVKKKVERSHEGHITEIIYKGNHNHPKPPTNRRSAIGSVNNPLSDMQADISESAEPQGGGDGELGWASTQKGNIARNNTDWKYENPEVTSPAAASVGPEFCNQSTNLLGQNGARFESGDAVDASSTFSNDEDDDDRGTHGSVSAGYEGEGDESESKRRKLESYPNTAELSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNVGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARNSNQGNAAASSAAAQATSVIHGHRAEAPQVHNGIGRLDRPALGLRSFSLPGAGPGPGRPQLGHGGFSFGIGMNQSGFPNLATVAALGPAHAKLPIMPVHPFLPHQCPPNEMGFMLPKGEPNLDPIPDRGVSIPAGSSVYQDIMSRMPLGPHM 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2821 717 SUPERFAMILY WRKY DNA-binding domain 278 338 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci2g2821 717 SMART WRKY_cls 279 337 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g2821 717 SMART WRKY_cls 502 561 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g2821 717 Gene3D WRKY domain 273 339 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci2g2821 717 MobiDBLite consensus disorder prediction 77 96 - -
Prci2g2821 717 MobiDBLite consensus disorder prediction 459 473 - -
Prci2g2821 717 MobiDBLite consensus disorder prediction 1 96 - -
Prci2g2821 717 FunFam WRKY transcription factor 271 339 - -
Prci2g2821 717 ProSiteProfiles WRKY domain profile. 274 338 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g2821 717 SUPERFAMILY WRKY DNA-binding domain 494 562 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci2g2821 717 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 146 579 IPR044810 GO:0003700
Prci2g2821 717 MobiDBLite consensus disorder prediction 30 51 - -
Prci2g2821 717 MobiDBLite consensus disorder prediction 428 476 - -
Prci2g2821 717 MobiDBLite consensus disorder prediction 169 190 - -
Prci2g2821 717 Pfam WRKY DNA -binding domain 503 559 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g2821 717 Pfam WRKY DNA -binding domain 280 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g2821 717 Gene3D WRKY domain 489 555 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci2g2821 717 MobiDBLite consensus disorder prediction 330 354 - -
Prci2g2821 717 ProSiteProfiles WRKY domain profile. 497 562 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g2821 717 FunFam WRKY transcription factor 33 489 555 - -
Prci2g2821 717 MobiDBLite consensus disorder prediction 235 251 - -
Prci2g2821 717 MobiDBLite consensus disorder prediction 235 286 - -
Prci2g2821 717 MobiDBLite consensus disorder prediction 338 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2821 Prci-Chr2 31638956 31643808 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2821 1 712 WRKY Transcription Factor Family AT5G56270 47.832 2.47e-180 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci2g2821 WRKY 8.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2821 K18835 - gmx:100796545 896.73