Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci2g2808 | ATGGCGTCATCGTCGAGCAGTGGATTGACGTTCAAGCTGCATCCCTTGGTGATAGTCAACATATCGGATCATTATACTCGGGTTAAGTCGCAGATGAAGCCGCCCATTGCATCCCATCAGAGAAGCACTACCTCCGCTAACACCAATGCTACTGACGGAATGGTTTCGCTGCCACCTAGGGTATACGGATGCGTGATAGGAGTACAGAGAGGACGCACTGTGGAGATCTTCAATAGCTTCGAACTTCTTTACGACCCTTCTACCCATTCCCTCGACCGTTCTTTTCTTGAAAAGAAGCAAGAGCTCTACAAGAAGGTTTTCCCTCACTTCTACATACTAGGATGGTATTCAACTGGGAGCGATGCCCAGGAATCAGATATGCATATTCACAAAGCTTTGATGGATATCAATGAAAGTCCAGTCTATGTGCTTCTGAATCCTTCAATCAATCATGCTCAGAAGGATCTTCCTGTCAGTATTTTTGAAAGTGAACTGCATGTAATAGATGGAATTCCGCAGCTGATCTTTGTTCGCTCAAGCTACACTATTGAGACTGTTGAAGCAGAACGAATTTCAGTTGATCATGTTGCACATCTTAAGCCATCAGATGGCGGTTCAGCTGCTACTCAATTGGCTGCTCACCTTACTGGTGTACACAGTGCTATTAAAATGCTGCATAGCAGAATTAAGGTGCTGCATCATTATCTTCTTGCAATGCAGAAAGGTGATGTACCTTGTGACAATTCTCTGTTAAGACAAGTATCAAGTCTCCTGAGAAGATTGCCAGCTATTGAATCTGGGAAATTCCAAGATGATTTCTTGATGGAATACAATGATACTTTACTGATTACTTACCTTGCCATGATGACCAACTGCTCAAGTGCAATGAACGAACTGGTCGACAAATTCAATATTGCATACGACAGGCATAGCAGAAGGGGTGGGCGAAGTGCTTTTATGTGA | 963 | 0.4361 | MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMKPPIASHQRSTTSANTNATDGMVSLPPRVYGCVIGVQRGRTVEIFNSFELLYDPSTHSLDRSFLEKKQELYKKVFPHFYILGWYSTGSDAQESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVSIFESELHVIDGIPQLIFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGVHSAIKMLHSRIKVLHHYLLAMQKGDVPCDNSLLRQVSSLLRRLPAIESGKFQDDFLMEYNDTLLITYLAMMTNCSSAMNELVDKFNIAYDRHSRRGGRSAFM | 320 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci2g2808 | 320 | Gene3D | Cytidine Deaminase, domain 2 | 1 | 201 | - | - | |
Prci2g2808 | 320 | ProSiteProfiles | MPN domain profile. | 36 | 167 | IPR037518 | - | |
Prci2g2808 | 320 | Pfam | JAB1/Mov34/MPN/PAD-1 ubiquitin protease | 7 | 139 | IPR000555 | GO:0005515|GO:0008233|GO:0008237 | |
Prci2g2808 | 320 | CDD | MPN_CSN6 | 9 | 316 | IPR033859 | GO:0000338|GO:0008180 | |
Prci2g2808 | 320 | FunFam | COP9 signalosome subunit 6 | 1 | 201 | - | - | |
Prci2g2808 | 320 | SMART | pad1_6 | 10 | 166 | IPR000555 | GO:0005515|GO:0008233|GO:0008237 | |
Prci2g2808 | 320 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED | 3 | 311 | - | - | |
Prci2g2808 | 320 | MobiDBLite | consensus disorder prediction | 33 | 51 | - | - | |
Prci2g2808 | 320 | MobiDBLite | consensus disorder prediction | 32 | 51 | - | - | |
Prci2g2808 | 320 | Pfam | Maintenance of mitochondrial structure and function | 187 | 301 | IPR024969 | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci2g2808 | 2 | 271 | Eukaryotic Initiation Factors Gene Family | AT2G39990 | 22.545 | 7.83e-10 | 57.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci2g2808 | K12179 | - | gmx:100786026 | 581.252 |