Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2744 ATGGCGACCAATACAGAGGACGTAAAGCATGAAAGCGAGGCACTTGGGATGACCGGAGAAAATGGAGGCGATGGCGCGGTGTCATCGTCGTCGTCAGAAGTTGTTCTGAAGAAAGGGCCGTGGACGGCGGCGGAGGACACAGTGTTGATAGAGTATGTGACAAAGCATGGAGAAGGGAATTGGAATGCGGTGCAGAGAAACACAGGACTAGCTCGCTGTGGCAAGAGCTGTAGGCTGAGATGGGCGAACCATTTGCGACCCAATTTGAAAAAAGGAGCTTTCTCTCCCGAGGAAGAGAAGCTCATCCTCGAGCTTCATGCACAGTTTGGTAACAAATGGGCTCGCATGGCTGCGTTGTTACCTGGGCGTACAGACAATGAAATCAAAAATTATTGGAACACGAGAGTGAAGCGCCGTCAACGACAAGGTCTGCCTCTTTATTCCAATGAACCTGATCATCGTCCCACCAACTCACCCAAAGCCACCATTAATGCTTCTCCAGCTCTTCCTAATAACGCTACACAATTCGAGTCCATTTATCAACGCTACCATTATCCTCCTTTGTCTCTTCAACTCCACTACCTCCCCAATATTCTCCTCTTTCATCGCCATTACAGCCTAAACCCACCATTTCTGACCCAATGA 645 0.4915 MATNTEDVKHESEALGMTGENGGDGAVSSSSSEVVLKKGPWTAAEDTVLIEYVTKHGEGNWNAVQRNTGLARCGKSCRLRWANHLRPNLKKGAFSPEEEKLILELHAQFGNKWARMAALLPGRTDNEIKNYWNTRVKRRQRQGLPLYSNEPDHRPTNSPKATINASPALPNNATQFESIYQRYHYPPLSLQLHYLPNILLFHRHYSLNPPFLTQ 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2744 214 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 18 169 - -
Prci2g2744 214 FunFam Transcription factor GAMYB 93 139 - -
Prci2g2744 214 SUPERFAMILY Homeodomain-like 37 132 IPR009057 -
Prci2g2744 214 CDD SANT 40 85 IPR001005 -
Prci2g2744 214 MobiDBLite consensus disorder prediction 142 169 - -
Prci2g2744 214 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 85 IPR017930 -
Prci2g2744 214 Gene3D - 93 139 - -
Prci2g2744 214 ProSiteProfiles Myb-like domain profile. 33 85 IPR001005 -
Prci2g2744 214 Pfam Myb-like DNA-binding domain 91 134 IPR001005 -
Prci2g2744 214 Pfam Myb-like DNA-binding domain 38 85 IPR001005 -
Prci2g2744 214 MobiDBLite consensus disorder prediction 1 31 - -
Prci2g2744 214 ProSiteProfiles Myb-like domain profile. 86 136 IPR001005 -
Prci2g2744 214 MobiDBLite consensus disorder prediction 151 169 - -
Prci2g2744 214 CDD SANT 93 134 IPR001005 -
Prci2g2744 214 FunFam MYB-related transcription factor 37 90 - -
Prci2g2744 214 SMART sant 37 87 IPR001005 -
Prci2g2744 214 SMART sant 90 138 IPR001005 -
Prci2g2744 214 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 140 IPR017930 -
Prci2g2744 214 Gene3D - 37 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2744 Prci-Chr2 28223007 28224513 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2744 36 154 MYB Transcription Factor Family AT2G32460 78.151 4.97e-68 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci2g2744 Myb_DNA-binding 2.4e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2744 - - pcin:129302692 433.721