Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2718 ATGGTGAGAAAGAGAATGGCTTCTGAAATGGAAGTTCACAACTCCGCCGGCGATTTTCATCTCCGGTTTCCCCACCACCGTCCAAATTCTCTATTATCCACCGTAGATAGAGCAGCAGCAGCAGCTTCAAGTAATCATAACATGACGGTCTCCAACTACTCCACTTCCACGCTTCTACCTTCTCCTTCCACCAATCTCACCGCCATGACGTCACCCAACTTCAGCAATCGTCATTGCGGTGATAATCTCTCTCTTCACCCTCATCTTCAAGCCCAGCAGGCCCAGCAGGACCCTTCGCCTCCTCCTGCAGTCTGTGGATTCTCCGGTTTGCCTCTATTCCCTTCTGAAAGTAATCGGCTTGATAATACTGTTGACGGTGTTGCTTCGGTGGCCACAAGCGCTGACGCCGGCCGACCTCTTCCTCCTCCTTCTATGGAAGATAGTTCAGCCATGGCTTGGATCGACGGCATCTTGAAGGATCTCATCCATGGCTCCACCGCTGTGTCCATCCCCCAACTCATCAACAACGTCAGGGAGATTATCTATCCTTGCAACCCCAACCTTGCTGTCATTCTTGAATACAGACTCCGTCTCCTCACTTCCGCTAATACTTCTGAATCTGTTCTGAATTATGGGGAGAAGAAAAGGACAGACGCGCCGCCTCCTCCTCCGGTGCCGGTGGCCGCGGGTTTAAACCAGAGGTCTTTTGTTGGTCAGCAAGTAGGCCCCTCTTTTGCTGCCGCTATGGCCCCCAACTTGCATATTCCAAATTCTTCATCTGTTGTTGGGAATCAGATGTACTCAAATTGGGGACTACCTCCAGTCACGGCGTTAACACACGAAGGCGGAAACCCACCGGTGATTACTTTACCACTATCTCCATTATCATCGTCAAACCATCAAGGTCATTCGCCACAGGAGGAGCAACAATTTCATGAGAAACAAGAGAATCAGAACCAGCAGCAACAAGAAGAGGGAGTGTCTTCGCCTTGTGATAATCGTCCGGTGACGACAACGACGACGGCTACAGCTACAGAAATCATCCTAGCAAGAAAGAAGAAAGAGGAGATGCAACAACAGAAAAGAGACGAAGAAGGGTTGCACCTCCTAACTTTGTTGCTTCAATGTGCTGAGGCTGTGGCAGCTGATAACTTCGATGAAGCTAATAAGATGTTGCTGGAGATCTCACAACTCTCGACGCCGTTTGGCACGTCGGCGCAACGTGTAGCAGCTTATTTCTCGGAAGCCATATCGGCGAGGCTGATTAACTCGTGCTTGGGAATATACGCTTCTCTGCCAATGGTGCCTCATAACCAAAAGATGGTATCAGCATTCCAAGTCTTCAACGGAATCAGTCCTTTCGTGAAGTTCTCACACTTCACAGCAAACCAAGCTATACAAGAAGCATTCGAGAGGGAAGAGAGAGTCCATATAATAGATTTAGATATAATGCAGGGATTGCAATGGCCTGGGCTGTTTCACATTTTGGCTTCAAGAGCTGGTGGGCCACCTTACGTCAGACTCACAGGGCTCGGCACCTCCATGGAAGCTCTTGAAGCTACTGGGAAACGATTGTCTGATTTTGCTAATAAATTAGGACTTCCTTTTGAGTTCTTCCCGGTGGCTGACAAAGTTGGGAATCTTGATCCTGAGAGGTTATGTGTAAGCAAGACAGAAGCTGTTGCCGTCCACTGGCTCCAACATTCTCTTTATGATGTCACTGGCTCTGATGCTAACACGCTCTGGCTTTTGCAGAGGCTGGCACCTAAAGTGGTGACGGTGGTGGAGCAGGATCTGAGCCATGCGGGGTCATTCTTGGGGAGGTTTGTGGAAGCGATACATTACTACTCAGCACTGTTTGATTCGCTTGGATCGAGCTATGGGGAAGAGAGTGAGGAGAGACACGTGGTGGAGCATCAGCTTCTGTCGAGGGAGATTCGAAACGTGCTGGCCATTGGAGGTCCGGCGAGGACCGGCGAGCTAAAGTTTCATAACTGGAGGGAGAAACTTCAGCAAAGTGGGTTCAGAGGAATCTCCCTCGCCGGCAACGCCGCGACGCAGGCCAGTTTGCTTCTGGGAATGTTTCCTTCTGATGGGTATACTTTGGTGGAGGACAATGGCACACTGAAGCTTGGTTGGAAAGATCTGTGCTTGCTTACTGCTTCTGCTTGGAGACCTTCGTTCCATAATGCCACTACTGCGATCGTCCACCATGGCTGA 2220 0.4995 MVRKRMASEMEVHNSAGDFHLRFPHHRPNSLLSTVDRAAAAASSNHNMTVSNYSTSTLLPSPSTNLTAMTSPNFSNRHCGDNLSLHPHLQAQQAQQDPSPPPAVCGFSGLPLFPSESNRLDNTVDGVASVATSADAGRPLPPPSMEDSSAMAWIDGILKDLIHGSTAVSIPQLINNVREIIYPCNPNLAVILEYRLRLLTSANTSESVLNYGEKKRTDAPPPPPVPVAAGLNQRSFVGQQVGPSFAAAMAPNLHIPNSSSVVGNQMYSNWGLPPVTALTHEGGNPPVITLPLSPLSSSNHQGHSPQEEQQFHEKQENQNQQQQEEGVSSPCDNRPVTTTTTATATEIILARKKKEEMQQQKRDEEGLHLLTLLLQCAEAVAADNFDEANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLINSCLGIYASLPMVPHNQKMVSAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRAGGPPYVRLTGLGTSMEALEATGKRLSDFANKLGLPFEFFPVADKVGNLDPERLCVSKTEAVAVHWLQHSLYDVTGSDANTLWLLQRLAPKVVTVVEQDLSHAGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEHQLLSREIRNVLAIGGPARTGELKFHNWREKLQQSGFRGISLAGNAATQASLLLGMFPSDGYTLVEDNGTLKLGWKDLCLLTASAWRPSFHNATTAIVHHG 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2718 739 ProSiteProfiles GRAS family profile. 360 725 IPR005202 -
Prci2g2718 739 Pfam GRAS domain family 370 725 IPR005202 -
Prci2g2718 739 MobiDBLite consensus disorder prediction 315 340 - -
Prci2g2718 739 MobiDBLite consensus disorder prediction 282 340 - -
Prci2g2718 739 MobiDBLite consensus disorder prediction 290 305 - -
Prci2g2718 739 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 325 720 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2718 Prci-Chr2 26694385 26697264 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2718 323 726 GRAS Transcription Factor Family AT3G54220 81.265 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci2g2718 GRAS 3.8e-122 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2718 - - qsa:O6P43_016422 845.499