Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2691 ATGGACTCTAACATTATTGTTGGGTACCACCGTGACTCATTCGTCAGAGGTTTATTGGTCGATCGCTTGAAGATTGATAGGTCCATGGTTAAGAATTACTCTGACATTAAAGAATATAAAGAGGCATTAGACAGAGGAAGTCATAAAGATGGCGTCGATGCTATTTTTGATCAAGTTCCATACATTAAGATCTTCCTCAAGCAGAATGGTTCCAATTATGCCATGGTTGCAACTAGGGACCGCATTGATGGATTTGGTTTTATTCCGCTTCCGTTCAATGTCAATGATCACCCTGTCTCCAGAATCGCTTCATCTCTCTCAAGTCTTAACGTTGAAATATATACTACAGTTGATTCCAAGATCAAAAAGGAGGACGAAGAGATAGCCGCAAAGGGAAGCTTCATACATCTACTCCTAAAAAGTCGCCGTTCATACCCTCCTCTAACAACTCGCACTGAATTGCGCCGCCTTCTCTCTGGTACCGTTTCAATTCTGATTAGTAGTTTCTACTCTCTTTTGTATTTGCTCACTAAAAATCAAATAATCAATTTCTGTGAAATTCTCAAATTAGATACACCGAAGTTGCTGAGAAATCTCCTAAATGCATGTGAACTGAAACGTTTCAGGCTTGAATCACTCAAAACGCAGCACTTCTGTCAGATGGCATACCCAAATCGCTACTGCTATGGCTTCCTCCTTATGATTTCTTGTTCTTGTGGTGTGTTGTTAATAGCTCCGATTGAAGCAGAAGATGATGCAGGGTCACTCTTGGGAGGGAAGAAGCTGATCATTGGACTTCCTTATAAATCAGGCTACACCCCATTTGTGGATGTACAACAACTCAATTCTTCTAATAACAATCAGGTCGTCCAGGTTGGGGGCTATTCTATTAACGTCTTCGATGCTACAATAGCCTACCTTAAGCGTTCGAATTACAATATTTCGTTCGAGTATAGAGCGTTTGTAGACGAAGAGGGAAACAGTGCTGGGGATTACGACGCACTTGTCCACCAGATTTTCGAAGGAAAGTATGATGCTGTGGTGGGAGATGTGACGATTTTGGCAAAACGGTTGAATTATGCTGATTTTACGTTACCATATACGCATTCTAATGTGAAGATGCTTGTGAAAGTTCGACATGATCCACGGTTGAATATGTGGATTTTTGTACGACCATTTAGTTGGAGTCTTTGGTTGTCCATTGCCATAATCTCTACTTTTATCGGAGGTATCTTACTATTCATGGAACGTAATGTCAACAAAGATTCAACGCATGAAAATTCACCATGTAGGAAACAATTCAATGGGATTTCTATCCTGTGGTTTCCTGTTGTACAGGCAATTTTTCCTGAAAGAGAATCACTAGCCAAAAATTGTTCAAGGTTTGTGCTGGCGATGTGGTTGATACTGGTATTTGTGCTCATGCAAAGCTACACAGCAAGCTTATCATCGATCTTGACAATACATCAGTTGCAACCTCGGTACCTTAGTGAGAACGATGTTACAGAAGATCCCAACATTATTGTTGGATACAATCACGGTTCATTTGTGGGAGACTTATTGATCAATGGCTTGAAGATCCATAGGTCAAGGGTGAAGAGCTACGCTAGCATTAAAGCATATAAGGAGGCTTTAGATAAAGGAAGTCGTAAAGTGGTGTTGATGCTATTTTTGATGAAGCTCCCTACTTTAAGGCTTTCCTCAAGAATTATGGCTCCAATTATGCAGTGGTTGGAACTAGGCACCATGCTGGTGGATTTGGTTTTGCATTTCGCAAGGGCTCCACGCTAA 1791 0.4087 MDSNIIVGYHRDSFVRGLLVDRLKIDRSMVKNYSDIKEYKEALDRGSHKDGVDAIFDQVPYIKIFLKQNGSNYAMVATRDRIDGFGFIPLPFNVNDHPVSRIASSLSSLNVEIYTTVDSKIKKEDEEIAAKGSFIHLLLKSRRSYPPLTTRTELRRLLSGTVSILISSFYSLLYLLTKNQIINFCEILKLDTPKLLRNLLNACELKRFRLESLKTQHFCQMAYPNRYCYGFLLMISCSCGVLLIAPIEAEDDAGSLLGGKKLIIGLPYKSGYTPFVDVQQLNSSNNNQVVQVGGYSINVFDATIAYLKRSNYNISFEYRAFVDEEGNSAGDYDALVHQIFEGKYDAVVGDVTILAKRLNYADFTLPYTHSNVKMLVKVRHDPRLNMWIFVRPFSWSLWLSIAIISTFIGGILLFMERNVNKDSTHENSPCRKQFNGISILWFPVVQAIFPERESLAKNCSRFVLAMWLILVFVLMQSYTASLSSILTIHQLQPRYLSENDVTEDPNIIVGYNHGSFVGDLLINGLKIHRSRVKSYASIKAYKEALDKGSRKVVLMLFLMKLPTLRLSSRIMAPIMQWLELGTMLVDLVLHFARAPR 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2691 596 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 8 100 IPR015683 -
Prci2g2691 596 Gene3D - 387 518 - -
Prci2g2691 596 Pfam Ligand-gated ion channel 394 500 IPR001320 GO:0015276|GO:0016020
Prci2g2691 596 Gene3D - 255 386 - -
Prci2g2691 596 Pfam Ligated ion channel L-glutamate- and glycine-binding site 273 378 IPR019594 GO:0004970|GO:0016020
Prci2g2691 596 SUPERFAMILY Periplasmic binding protein-like II 239 554 - -
Prci2g2691 596 SMART GluR_14 261 470 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2691 Prci-Chr2 25405285 25411358 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2691 7 87 Ion Channels AT2G29100 35.802 3.41e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2691 K05387 - pcin:129319703 721.079