Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2689 ATGTTAAGAACTTTGAGGCAGGAGCAGGATGGCAATCATGAAATACATTGCTCTAGGGAAAGAAGTAGAGCAGCTTGGAAGATCGTTCAGGAGTATTTGATGCCATTTGTGGAGAAGGAAAAATATCAAATCACAAAAAGATGCAGGCTTCACCCTGATAATGATCTATATAGAGATCAGGAGCAACATAAATTTCATATAGATATCAATGAATGGCAGTGTGGATATTGCAAAAAAAGTTTCTATGAAGAGAAAAATCTTGATCTGCATTTTGACAACAGACACTCCAATTTACTTGACCTGAGTCAACGAAAGTGTTTAGCAGATGTATGTGGAGCACTGCACTGTGACCAAATAATGAATTCTGGGTCAAAAAAGTCGAAGTGCAATCCTGCTGCTGCTGCAAGGAATAAACATCTATGTGAGAGCTTAGCTGATAATTGCTTTCCAGTTAGCGAGGGCCCTGCTGCAAGCCGACTTCATGAATTCTTCTTGCGTCAATTCTGTGATGCACATACCTGCGCTGGAAGTGAAAAACCTTTCTCTAGAGGCCGTAGGAAGAAGATGAATGCGTTATACCTTGTTGTCTCCATTTTAGTAGTTATGGCGCTCATACTTTTCTATCTCTACATTTTCTTATATCAGAGAGGGATGAAAAGGGGCACACAAGTGCTGCGACGCATCTCACAGACCAACCGAAAGAAAAAGCCCTCTTAA 717 0.4073 MLRTLRQEQDGNHEIHCSRERSRAAWKIVQEYLMPFVEKEKYQITKRCRLHPDNDLYRDQEQHKFHIDINEWQCGYCKKSFYEEKNLDLHFDNRHSNLLDLSQRKCLADVCGALHCDQIMNSGSKKSKCNPAAAARNKHLCESLADNCFPVSEGPAASRLHEFFLRQFCDAHTCAGSEKPFSRGRRKKMNALYLVVSILVVMALILFYLYIFLYQRGMKRGTQVLRRISQTNRKKKPS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2689 238 ProSiteProfiles Zinc finger C2H2 type domain profile. 72 97 IPR013087 -
Prci2g2689 238 PANTHER ZINC FINGER PROTEIN-RELATED 8 237 - -
Prci2g2689 238 ProSitePatterns Zinc finger C2H2 type domain signature. 74 95 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2689 Prci-Chr2 25251963 25256534 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2689 14 238 C2H2 Transcription Factor Family AT5G63280 66.667 5.75e-112 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci2g2689 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2689 - - gmx:100527694 415.231