Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2688 ATGATGACGAAGAAGAATTCTTTCGCTTCGCATTATCGACGGTTCGTGTTTTGCATTCTTTGTGTCTCTTTAGTTCTGCTGCCTCCGAGGGTTTCTTCAAGCTCGCCACCCACTCCACGCTCTGATCATGGTAGTACAGATTCAACCGGTGGAAGAACTTTGAGGCAGGAGCAGGATGGCAATCATGAAATACATTGCTCTAGGGAAAGAAGTAGAGCAGCTTGGAAGATCGTTCAGGAGTATTTGATGCCATTTGTGGAGAAGGAAAAATATCAAATCACAAAAAGATGCAGGCTTCACCCTGATAATGATCTATATAGAGATCAGGAGCAACATAAATTTCATATAGATATCAATGAATGGCAGTGTGGATATTGCAAAAAAAGTTTCTATGAAGAGAAAAATCTTGATCTGCATTTTGACAACAGACACTCCAATTTACTTGACCTGAGTCAACGAAAGTGTTTAGCAGATGTATGTGGAGCACTGCACTGTGACCAAATAATGAATTCTGGGTCAAAAAAGTCGAAGTGCAATCCTGCTGCTGCTGCAAGGAATAAACATCTATGTGAGAGCTTAGCTGATAATTGCTTTCCAGTTAGCGAGGGCCCTGCTGCAAGCCGACTTCATGAATTCTTCTTGCGTCAATTCTGTGATGCACATACCTGCGCTGGAAGTGAAAAACCTTTCTCTAGAGGCCGTAGGAAGAAGATGAATGCGTTATACCTTGTTGTCTCCATTTTAGTAGTTATGGCGCTCATACTTTTCTATCTCTACATTTTCTTATATCAGAGAGGGATGAAAAGGGGCACACAAGTGCTGCGACGCATCTCACAGACCAACCGAAAGAAAAAGCCCTCTTAA 864 0.4213 MMTKKNSFASHYRRFVFCILCVSLVLLPPRVSSSSPPTPRSDHGSTDSTGGRTLRQEQDGNHEIHCSRERSRAAWKIVQEYLMPFVEKEKYQITKRCRLHPDNDLYRDQEQHKFHIDINEWQCGYCKKSFYEEKNLDLHFDNRHSNLLDLSQRKCLADVCGALHCDQIMNSGSKKSKCNPAAAARNKHLCESLADNCFPVSEGPAASRLHEFFLRQFCDAHTCAGSEKPFSRGRRKKMNALYLVVSILVVMALILFYLYIFLYQRGMKRGTQVLRRISQTNRKKKPS 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2688 287 MobiDBLite consensus disorder prediction 32 55 - -
Prci2g2688 287 ProSiteProfiles Zinc finger C2H2 type domain profile. 121 146 IPR013087 -
Prci2g2688 287 MobiDBLite consensus disorder prediction 32 64 - -
Prci2g2688 287 ProSitePatterns Zinc finger C2H2 type domain signature. 123 144 IPR013087 -
Prci2g2688 287 PANTHER ZINC FINGER PROTEIN-RELATED 15 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2688 Prci-Chr2 25251963 25256664 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2688 44 287 C2H2 Transcription Factor Family AT5G63280 62.602 4.99e-111 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci2g2688 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2688 - - lang:109338698 439.113