Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2677 ATGGAAACATTGAATGCTCTCCTCAAGGATTCAGAGCAAAAGCTAAACAAATATGAAGTAATCGCAAAGGAGTTTGACCAAATCCAAGAGGTTGTTCATGAAGCTGAGGATGTGATCGACACTTACATCTATGATCTTAATCGGCAAAGAATCAAACGGTGGTGGGATCTGACCAACTATGTAAGTCACACAAAGCTTCTTCACGATCTTGCAGACAAGATAGAAAAAATTAAGGTTAGGATTGAAGCTATACAAAGCAACCAACAACTTGCCATGGAATTGCTTCATAATATCCAAGGAGAGACGGAGATAGAGACAGAGATAGAGATGGATACAAAGGCCATTTTGAAGGAATATAGGAGAAATGTTGAAAAAGATGATGTGGTTGGCTTTAATGTCTACTCTGATAAGGTGATCAAGCGACTCACGGGTGGGAATAAAGAACTTAAGGTCATCTCCATAATTGGCATGGGTGGGCAGGGAAAAACCACTCTTGCTAGGAAGATCTACAAAAATGATTATCTCAAGAGAAGGTTTGATAGATTTGCGTGGGCTGATGTTTCAGAAGACTGGCAAGCTGAAGCAGTATTGCTCATTCTCTTGGCCCAAGTGGGATCAAGTAGTTATCATGGAATGAGTAAGGAAAATCTAAAACAAGAGATCCAAAAAGAACTGGAAGATGGAATGAGTGTGGAGAATTTGTTAAAGCAAAAAATCCATGAAAGCTTGAGGAGAAATCCATATCTCATTGTCCTTGACGACATATGGAGACCTGAAGCATGGCGTTCCATAAATGATGCTTTTCCTGATGACAAAAATGGGAGTAGAATATTGATCACTAGTCGATCAGAACAAGTTGCTCGTGTTGCAAGTCCGTCTCAAGAGTTTGTATACCAGCTTCCATCTCTCAACACAGAACAAAGTTGGGAACTTCTATCAAAGAGGGTGTTTATGGGAGAGCAGTGCCCTCATGAATTGGAAGATCTTGGAAGGAAAATGGCTAAAAGTTGTCATGGATTACCTTTATCCATTGTGGTGTTGGCTGGCATTTTAGCAAAACTAGAGAGATCTAAGGCAAGTTGGTCTTATGTTGCTGGAAATGAAATTTGGCATCTTTTTCAACAAAAAGCTGAATGCACTGACATTTTGGCACTAAGTTATAAATTCTTACCCCAGCATCTAAAACCATGCTTTCTGTATGTTGGTCATTACCCTGAAGACTTCAAAGTTTGTGTTAGGAAATTGATTAAACTTTGGATAGCAGAAGGGTTAATACCAAAAGATACAGGCAATAAGCAACCAGAGGATGTTGCAGAATACTACTTGATGGAGCTCATTGACCGAAGCCTGATCCAAGTTGAAAGCAAGAGGACTGATGGGGGTGTGAAGGTATGTCGCATTCATGATCTTTTACGAGCATTTTGCATAGAAGAAAGCAAAAGGCAAAAGTTCTATGAGATCATTACTATGACCAGTAGTTCAAATTTGGTCAACCCTCAAAGATTATTCGTGTATCATCAAGCTTCAACTTACCTAGCTTCTAGTCTTAGTGCTAATCATTCATCTGTGCGTTCTTTGATTTTCTTTGGAAGAGAAGAAAGGGTTGTCACATGTTGGGAAGTCATTTTGAAGGACTTCAAATTGGTTCGAGTCCTTGATATCTCCTCTATTGTGACTATAAGAATTCCAAAAAGAATTGGGCAGCTAATCCATCTAAGGTACCTGAAGTTCAAAAATACTGTTGATCTTTATCCAAGACCAAGGGTGCCAAAAACAATATTTGACCTACAAAATTTAGAAACTTTGGAGATTGAGGGGAATGCTGTGATTCTATCAAGGAGCATAGAAAAACTAAAACGTTTAAAGCATCTTTTTCTTCCAAAAAATTCAAAGATGCCCCTTCTCAATGGTCATCTAGACAATCTTGAAATCCTCTCTTATTTTACTGTTGAAGATAGTCCAGGTACCTCCCTAACCTATATGCACAAACTTAGAAAATTGGGGTTATACGATTGGGATTCATATCCACATAACTCTTGGCAACACCTTCAAACCTTATCTGATCTGCAAACACTCAAGATTAAAGCTTACAAGTTCCCTCAAATATATGCAATAATTGTTCTATCAAAATTGACCAAGATATCATTGTGGCTGGGTTCTGAAGATGTGTCTATGGAAGTTCTTGGAGCCATTTCAAGTTTGAGATTTTAA 2211 0.3849 METLNALLKDSEQKLNKYEVIAKEFDQIQEVVHEAEDVIDTYIYDLNRQRIKRWWDLTNYVSHTKLLHDLADKIEKIKVRIEAIQSNQQLAMELLHNIQGETEIETEIEMDTKAILKEYRRNVEKDDVVGFNVYSDKVIKRLTGGNKELKVISIIGMGGQGKTTLARKIYKNDYLKRRFDRFAWADVSEDWQAEAVLLILLAQVGSSSYHGMSKENLKQEIQKELEDGMSVENLLKQKIHESLRRNPYLIVLDDIWRPEAWRSINDAFPDDKNGSRILITSRSEQVARVASPSQEFVYQLPSLNTEQSWELLSKRVFMGEQCPHELEDLGRKMAKSCHGLPLSIVVLAGILAKLERSKASWSYVAGNEIWHLFQQKAECTDILALSYKFLPQHLKPCFLYVGHYPEDFKVCVRKLIKLWIAEGLIPKDTGNKQPEDVAEYYLMELIDRSLIQVESKRTDGGVKVCRIHDLLRAFCIEESKRQKFYEIITMTSSSNLVNPQRLFVYHQASTYLASSLSANHSSVRSLIFFGREERVVTCWEVILKDFKLVRVLDISSIVTIRIPKRIGQLIHLRYLKFKNTVDLYPRPRVPKTIFDLQNLETLEIEGNAVILSRSIEKLKRLKHLFLPKNSKMPLLNGHLDNLEILSYFTVEDSPGTSLTYMHKLRKLGLYDWDSYPHNSWQHLQTLSDLQTLKIKAYKFPQIYAIIVLSKLTKISLWLGSEDVSMEVLGAISSLRF 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2677 736 CDD RX-CC_like 2 84 IPR038005 -
Prci2g2677 736 Coils Coil 1 21 - -
Prci2g2677 736 FunFam Probable disease resistance protein At1g61300 110 294 - -
Prci2g2677 736 Gene3D - 104 297 IPR027417 -
Prci2g2677 736 PRINTS Disease resistance protein signature 337 351 - -
Prci2g2677 736 PRINTS Disease resistance protein signature 151 166 - -
Prci2g2677 736 PRINTS Disease resistance protein signature 594 610 - -
Prci2g2677 736 PRINTS Disease resistance protein signature 242 256 - -
Prci2g2677 736 FunFam Probable disease resistance protein At1g63360 387 477 - -
Prci2g2677 736 Coils Coil 67 87 - -
Prci2g2677 736 Pfam NB-ARC domain 136 365 IPR002182 GO:0043531
Prci2g2677 736 Gene3D - 1 91 - -
Prci2g2677 736 PANTHER DISEASE RESISTANCE PROTEIN RP 19 717 IPR044974 GO:0006952
Prci2g2677 736 Gene3D - 302 385 IPR042197 -
Prci2g2677 736 Gene3D - 386 479 IPR036388 -
Prci2g2677 736 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 400 IPR027417 -
Prci2g2677 736 Gene3D Ribonuclease Inhibitor 506 735 IPR032675 -
Prci2g2677 736 SUPERFAMILY L domain-like 493 717 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2677 Prci-Chr2 24963960 24967284 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2677 148 344 WRKY Transcription Factor Family AT5G45050 25.758 2.52e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2677 - - pcin:129302254 1449.88