Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2664 ATGCGTCATGTGTGTGTATGTATTTTACAAAAAAAACTTGAGTTTGCAGGTATGTTAAGTGAATTGCAGCAGTTGAGTGCTGAAAATCAGCGTCTGAGAGATGAGCTTGATCAGATGAACCTAAAGTACAATGTCCTGAAATTACAATTTACCAAGCCCAACCAGACACAAAGTAATGAGGTAGAAGAAGGCAGTGGAGGGATTGAGAGGAAAGGAGGGATGGTCTTAGGGCGATTATTAGTTAAAAAAGATGATAATAATAATAATAATAAAAGTGAAGGCAATAAAATGATGAGAGAAATTAGCAAAAGCAATAATATTATGCTTGATTTGATGGAACGCAAGATTGAGCAGCACAGAGATAGTGATCAGCCACTGAACAGTGGTACTCACAACAAAGTTCACGGGAAGGACCCTAATAATGATGCAAAAGCTTCTTTTTCAGAAACCTTATCACTTGTCAAGAAAGCTCGTGTGTCAGTTCGAGCACGATCAGAGTCTTCAATGATATCAGACGGATGCCAATGGAGGAAATATGGGCAGAAGATGGCAAAAGGAAACCCTTGCCCACGAGCGTATTATCGTTGCTCCATGGGAACTGCTTGTCCTGTACGAAAACAAGTACAGAGATGTGCTGAAGATAGAAGCATTCTCATAACTACATATGAAGGACAACACAACCACGCACTTCCACCAGCTGCAAAAGCTATGGCTTCAACAACATCTTCAGCTGCATCAATGCTTCTTTCAGGATCAATTCAAAGTTCAGATCATCATGATCGTCTTCCTTATCATCACCATCATCATCACCACCACCACAATAACCTCATAAACCCTAATGTATTAGAAAGTGCTTCAATACTTCCTTCCTCACACAGCATGGCTACCCTCACAGCCTCAGCTCCATTTCCCACCATAACATTGGACCTCACTCATCATCAGACAACCCAGCCGACAACGAAGATTTTCGGTCAAGCTCTGAGCGATCATCAGCAATCTAGGGTTTCTCAGGGAACGGTGTTGTCATCGTCGTTGGCCGACACAGTAAATGCGGCGACAGCTGCTATTACAGCGGATCCAAACTTTACTGTAGCTCTTGTGGCTGCCATAACTTCTATCATTGGAAGTTCTCATTCGAACAGTAGTAATAATGGTGCTGATGTTACTGCGAGTGGAAAACCCTAG 1185 0.4219 MRHVCVCILQKKLEFAGMLSELQQLSAENQRLRDELDQMNLKYNVLKLQFTKPNQTQSNEVEEGSGGIERKGGMVLGRLLVKKDDNNNNNKSEGNKMMREISKSNNIMLDLMERKIEQHRDSDQPLNSGTHNKVHGKDPNNDAKASFSETLSLVKKARVSVRARSESSMISDGCQWRKYGQKMAKGNPCPRAYYRCSMGTACPVRKQVQRCAEDRSILITTYEGQHNHALPPAAKAMASTTSSAASMLLSGSIQSSDHHDRLPYHHHHHHHHHNNLINPNVLESASILPSSHSMATLTASAPFPTITLDLTHHQTTQPTTKIFGQALSDHQQSRVSQGTVLSSSLADTVNAATAAITADPNFTVALVAAITSIIGSSHSNSSNNGADVTASGKP 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2664 394 Gene3D WRKY domain 155 232 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci2g2664 394 SUPERFAMILY WRKY DNA-binding domain 163 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci2g2664 394 ProSiteProfiles WRKY domain profile. 165 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g2664 394 MobiDBLite consensus disorder prediction 256 275 - -
Prci2g2664 394 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 14 384 IPR044810 GO:0003700
Prci2g2664 394 SMART WRKY_cls 170 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g2664 394 Pfam WRKY DNA -binding domain 172 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g2664 394 Coils Coil 15 49 - -
Prci2g2664 394 MobiDBLite consensus disorder prediction 120 144 - -
Prci2g2664 394 FunFam probable WRKY transcription factor 31 155 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2664 Prci-Chr2 24497269 24502904 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2664 154 374 WRKY Transcription Factor Family AT4G04450 56.680 1.16e-80 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci2g2664 WRKY 2.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2664 - - pcin:129303865 681.789