Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2662 ATGGAAGCCCATTCTTCTTCTCCCCCGACGACGTCGTTTCTTCACCGGAAACGTCTCCTCCACGAGATGGATTTCTTCTCCGACGACAAAAAGACAATCAAGACCACTACTGGTCATCAACATGAGTATCATGATCATGATCTGATGCTAAACGGATCAACCGACCTAATTCACGTTGATGCGAGTTTAGATCTTGTTTCTAAGACTACCACGAGCGACAGATTGACTATGGATGATGGAGCATTAGACGCCGTGGAAGATAACAAGAAAAAAGAGTTTGCAGGTATGTTAAGTGAATTGCAGCAGTTGAGTGCTGAAAATCAGCGTCTGAGAGATGAGCTTGATCAGATGAACCTAAAGTACAATGTCCTGAAATTACAATTTACCAAGCCCAACCAGACACAAAGTAATGAGGTAGAAGAAGGCAGTGGAGGGATTGAGAGGAAAGGAGGGATGGTCTTAGGGCGATTATTAGTTAAAAAAGATGATAATAATAATAATAATAAAAGTGAAGGCAATAAAATGATGAGAGAAATTAGCAAAAGCAATAATATTATGCTTGATTTGATGGAACGCAAGATTGAGCAGCACAGAGATAGTGATCAGCCACTGAACAGTGGTACTCACAACAAAGTTCACGGGAAGGACCCTAATAATGATGCAAAAGCTTCTTTTTCAGAAACCTTATCACTTGTCAAGAAAGCTCGTGTGTCAGTTCGAGCACGATCAGAGTCTTCAATGATATCAGACGGATGCCAATGGAGGAAATATGGGCAGAAGATGGCAAAAGGAAACCCTTGCCCACGAGCGTATTATCGTTGCTCCATGGGAACTGCTTGTCCTGTACGAAAACAAGTACAGAGATGTGCTGAAGATAGAAGCATTCTCATAACTACATATGAAGGACAACACAACCACGCACTTCCACCAGCTGCAAAAGCTATGGCTTCAACAACATCTTCAGCTGCATCAATGCTTCTTTCAGGATCAATTCAAAGTTCAGATCATCATGATCGTCTTCCTTATCATCACCATCATCATCACCACCACCACAATAACCTCATAAACCCTAATGTATTAGAAAGTGCTTCAATACTTCCTTCCTCACACAGCATGGCTACCCTCACAGCCTCAGCTCCATTTCCCACCATAACATTGGACCTCACTCATCATCAGACAACCCAGCCGACAACGAAGATTTTCGGTCAAGCTCTGAGCGATCATCAGCAATCTAGGGTTTCTCAGGGAACGGTGTTGTCATCGTCGTTGGCCGACACAGTAAATGCGGCGACAGCTGCTATTACAGCGGATCCAAACTTTACTGTAGCTCTTGTGGCTGCCATAACTTCTATCATTGGAAGTTCTCATTCGAACAGTAGTAATAATGGTGCTGATGTTACTGCGAGTGGAAAACCCTAG 1419 0.4306 MEAHSSSPPTTSFLHRKRLLHEMDFFSDDKKTIKTTTGHQHEYHDHDLMLNGSTDLIHVDASLDLVSKTTTSDRLTMDDGALDAVEDNKKKEFAGMLSELQQLSAENQRLRDELDQMNLKYNVLKLQFTKPNQTQSNEVEEGSGGIERKGGMVLGRLLVKKDDNNNNNKSEGNKMMREISKSNNIMLDLMERKIEQHRDSDQPLNSGTHNKVHGKDPNNDAKASFSETLSLVKKARVSVRARSESSMISDGCQWRKYGQKMAKGNPCPRAYYRCSMGTACPVRKQVQRCAEDRSILITTYEGQHNHALPPAAKAMASTTSSAASMLLSGSIQSSDHHDRLPYHHHHHHHHHNNLINPNVLESASILPSSHSMATLTASAPFPTITLDLTHHQTTQPTTKIFGQALSDHQQSRVSQGTVLSSSLADTVNAATAAITADPNFTVALVAAITSIIGSSHSNSSNNGADVTASGKP 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2662 472 FunFam probable WRKY transcription factor 31 233 310 - -
Prci2g2662 472 SMART WRKY_cls 248 308 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g2662 472 Gene3D WRKY domain 233 310 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci2g2662 472 ProSiteProfiles WRKY domain profile. 243 309 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g2662 472 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 78 462 IPR044810 GO:0003700
Prci2g2662 472 MobiDBLite consensus disorder prediction 334 353 - -
Prci2g2662 472 Pfam WRKY DNA -binding domain 250 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g2662 472 Coils Coil 93 127 - -
Prci2g2662 472 MobiDBLite consensus disorder prediction 198 222 - -
Prci2g2662 472 SUPERFAMILY WRKY DNA-binding domain 241 309 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2662 Prci-Chr2 24496908 24512491 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2662 22 462 WRKY Transcription Factor Family AT1G62300 38.229 1.57e-80 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci2g2662 WRKY 2.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2662 - - pcin:129303865 862.833