Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2648 ATGGCGAATTTGCCTCAATCCCTCTCGATCAATGCGCCATTTGCAGCTGCTGGTTCCTCCGCCCAAAATGCCGCCGCCGCTTCTCAGGCCAACAAGGATCACAAGATGGCGTCTGTAGAGCATCTCATTCTGCAACTGAGCAATCCTGATCTTCGTGAGAATGCCCTTCTTGAGCTCTCTAAGAAGAGGGAATTGTTTCAAGACCTGGCGGTAGCCCCATTGTTGTGGAATTCATTTGGTACCATTGCTGCACTTTTGCAGGAAATAGTTTCAATATACCCCGTTCTTTCACCCCCAAACCTTACTCCAGCACAATCAAATCGAGTGTGCAATGCTCTTGCTCTTCTTCAGTGTGTTGCATCTCACCCAGATACAAAGATGCTATTCCTCAATGCCCATATACCTCTATATCTTTATCCTTTTCTTAATACAACAAGCAAATCAAGACCATTTGAATACTTAAGGCTTACTAGTCTAGGTGTCATTGGTGCCCTGGTGAAGCAGGTTGATGATACAGAAGTTATCAGTTTTCTTCTTTCAACAGAAATAATTCCACTCTGCCTTCGCACCATGGAAATGGGTAGTGAATTGTCAAAAACAGTTGCAACATTTATAGTTCAAAAAATTTTGTCAGACGATGTGGGCCTGGATTATATTTGTACTGCAGCTGAGCGATTCTTTGCAGTTGGTCGAGTTTTGGCGAACATGGTGGCATCTCTCGCTGAGCAACCCTCATCTCGTCTGTTGAAACACATTATCTGTTGTTATCTTCGTCTATCAGATAATCCAAGGGCTTGTGCTGCATTAAGAAATTGCCTTCCGGACATGCTAAGGGATGCTACATTCAGTAGTTGTCTCCGTGAAGATCCAACAACCAGGAGATTGCTGCAACAATTGCTTCACAATGTCGAAGTGAATCGCATGCCGCCGCTATAG 936 0.4434 MANLPQSLSINAPFAAAGSSAQNAAAASQANKDHKMASVEHLILQLSNPDLRENALLELSKKRELFQDLAVAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTKMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKQVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILSDDVGLDYICTAAERFFAVGRVLANMVASLAEQPSSRLLKHIICCYLRLSDNPRACAALRNCLPDMLRDATFSSCLREDPTTRRLLQQLLHNVEVNRMPPL 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2648 311 Pfam Cell differentiation family, Rcd1-like 42 303 - -
Prci2g2648 311 FunFam Cell differentiation protein RCD1 32 306 - -
Prci2g2648 311 Gene3D - 30 305 IPR011989 -
Prci2g2648 311 PANTHER UNCHARACTERIZED 30 307 IPR007216 GO:0006402|GO:0030014
Prci2g2648 311 SUPERFAMILY ARM repeat 45 276 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2648 Prci-Chr2 24303904 24310169 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Prci2g2648 Rcd1 4.2e-124 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2648 K12606 - pop:7483613 519.62