Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2636 ATGAAGGCCATGAAACGTATTGTTGTGGGGTTCTTTGCCATGTGGTGGGTTACAAGGTGGAGCAGCTTGGCCATGGGAACAAACACAATGAAGTTCCCAGTCGGAGTGATTGTGGACGAAGGCACTTGGATTGGGAAATTAGGTTTGAGCTGCATCCACATGGCTCTTTCTGATTTCTATGCTTCCCACTCTCACTACAACACTAGGATCCATCTCACCATCAAGCATACTGATGCACATATGATTGCAGCTGCTTCAGCAGTGGCACAGAATGAGGCAACTCAAGTGGCAGCTATTACAGCAATTGTCCAAGCTTTTGGATGGAACCAAGTGGTGCTAATCTATGAAGAAGGCTTATATGGGGAGGAAGTGATACCTCACATTATGAAAACCTTGCAAGATGCAAATGTTCATGTTCCCTATCAAATTGCAATTTCCCCATCAACAACTGACCAACAAATTATTAAAGAGCTGGCCAATTTAAGAATGATGTCCAACAGAGTTTTTATCATACATATGCCACCAATCCTAGGTTTACGTGTGTTTACCAAGGCAAGAGACATTGGAATGATAAGCCAAGGCTATGTTTGGATCATGACCACCTCAATGACTAATCTATTAGATTGGACAAATTCTTCTATCACCGACTTGATGCAAGGGGTTGTAGGTGTGGCTTCCTATTTTCCAAAATCCAAAGAGGTTCAAGATTTTGAAGTTCAGTGGAAACTAAAATTTCAAAAAGAGAATCCAAACATCATAGGAGCCCAATTGAATGTTTTGGGTTTGTGGGCCTATGATGCTGCAACGGCACTAGCCATAGCAGTGGAGAAGGCTAGGATTACCAAATTGAGTTTCCAAAGGAAAAATGTTTCTAAATCATGTAATACAACAGACTTTGAAACTATTAGGGTCTCTCAAAGTGGTTCAAAACTACAGGATGCACTTTCCAAAACTGCATTTAAAGGCCTTTCAGGGAAGTTCAATTTGGTCAATGGAGAAATGAATTCAAAAACTTTCCAAATAATCAACATAAATGGTGACGGAAAGAAAGTAGTAGGATTTTGGACCCCACATAATGGATTAGAAAGAGAACTGAGTCCTAAAAACATGAGCAAATATTCTACATCAAAAGCCAATCTTAAACAAATTATTTGGCCAGGGGATTCTCCCATTGCTCCTAAAGGGTGGGATGTAGGGGCAAATGGAAAGAGGCTGAAAGTAGGCATTCAAGTAAAAAGGGGATTCTTTGAATCTTTCAATATACACCATGATTCTGTTAATGATACTATGACTTTTAATGGCTACTGCATTGATATTTTCATAGCAGTCATGAGAGCATTACCATATAGTGTTCCTTTTGAATTTATCCCTTTCAACATACCTAATCTTGACCGTGACTATTTACGCCCTGGAGTATTCTATGATGATTTGATCCAGAAGGTTTATGTTGGGGAAATTGATGCAGTTGTAGGAGATTTGACTATTATGTTCGAGAGGTCTCAATATGTGGACTTCACATTGCCCTTTACTGAAGGTGGGGTAAATTTTCTTGTGCCAACTAAACAAAAGAACAAGGAAAAAGCTTGGCTCTTCTTAAAGCCCTTGACATGGGAATTATGGCTCGCCACTGGTTGCTTCTTTGTGTTCATTAGTTTTGTGGTTTGGGTGCTAGAACACCAAAACAACGAAGAATTCAGGGGTTCCCCCTCCAATCAAATTGGCAATAGCTTTTGGTTCTCCTTCTTAACCATGGATTTTGCCCAAAGGGAGAAAATTCATAGCAACCTGGCTCGAGTTGTGGTGATCATATGGGCATTTGTGGTGCTCATACTAACACAAAGCTACACAGCTAGTTTTACAACGCTCTTGACTGTTCAACAACTCCAGCCGACCGTGATAGACATAAATCAACTCATACGGAGTAGGGAATCTATTGGGTACCAATTGGGTTCTTATACTTACAACATTTTAAAACAAATAGGCTTTGATGAAAGTAGGCTTCGGTCTTACAATTCTCCACAACAATGTGATCACCTTTTAACAATTGGAAGCCAACATGGGGGTATTGTTGCTGCTTTTGATAAAATCCCATATCTTAAAGCAATGGAAACAAGTTATTGCTCGAAATACACAATGATAGGACCTACCTATAATCATCCAGGGTTTGGTTTTGCTTTCCGAAGAAATTCGCCTCTTGTAAATGATGTTTCAAGGGCTATATTGAACTTGACAGAGAAGAATGAAGGCGGGATGAAAGAAATTGAAAATGCATGGTTCGAGAATGCAAGTCATTGTAAGTGGCAGTCTGATGTGGAGGCAACCTACAGTCTCAATATTGATAGCTTTCGGGGACTATTCCTAATTGCAGTACTAGCTTCATCCTTAGCTCTCGTTGTTCACATAGCTATGTTCCTTATCGATAGCTGGAAACATTTGAATTGCTTTGATCCATCAGACCCTTTCTTCAAAAGAATTTGTGTCATGGTAAAAGTTTTCTACCATCACTACAACACAAACACTCCATTCCTAGCTGCTCCACAAACTACCACACATCAAGTACCCTAA 2565 0.3992 MKAMKRIVVGFFAMWWVTRWSSLAMGTNTMKFPVGVIVDEGTWIGKLGLSCIHMALSDFYASHSHYNTRIHLTIKHTDAHMIAAASAVAQNEATQVAAITAIVQAFGWNQVVLIYEEGLYGEEVIPHIMKTLQDANVHVPYQIAISPSTTDQQIIKELANLRMMSNRVFIIHMPPILGLRVFTKARDIGMISQGYVWIMTTSMTNLLDWTNSSITDLMQGVVGVASYFPKSKEVQDFEVQWKLKFQKENPNIIGAQLNVLGLWAYDAATALAIAVEKARITKLSFQRKNVSKSCNTTDFETIRVSQSGSKLQDALSKTAFKGLSGKFNLVNGEMNSKTFQIININGDGKKVVGFWTPHNGLERELSPKNMSKYSTSKANLKQIIWPGDSPIAPKGWDVGANGKRLKVGIQVKRGFFESFNIHHDSVNDTMTFNGYCIDIFIAVMRALPYSVPFEFIPFNIPNLDRDYLRPGVFYDDLIQKVYVGEIDAVVGDLTIMFERSQYVDFTLPFTEGGVNFLVPTKQKNKEKAWLFLKPLTWELWLATGCFFVFISFVVWVLEHQNNEEFRGSPSNQIGNSFWFSFLTMDFAQREKIHSNLARVVVIIWAFVVLILTQSYTASFTTLLTVQQLQPTVIDINQLIRSRESIGYQLGSYTYNILKQIGFDESRLRSYNSPQQCDHLLTIGSQHGGIVAAFDKIPYLKAMETSYCSKYTMIGPTYNHPGFGFAFRRNSPLVNDVSRAILNLTEKNEGGMKEIENAWFENASHCKWQSDVEATYSLNIDSFRGLFLIAVLASSLALVVHIAMFLIDSWKHLNCFDPSDPFFKRICVMVKVFYHHYNTNTPFLAAPQTTTHQVP 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2636 854 Gene3D - 406 527 - -
Prci2g2636 854 Pfam Ligand-gated ion channel 761 792 IPR001320 GO:0015276|GO:0016020
Prci2g2636 854 SMART GluR_14 404 761 IPR001320 GO:0015276|GO:0016020
Prci2g2636 854 SUPERFAMILY Periplasmic binding protein-like II 383 760 - -
Prci2g2636 854 Gene3D - 702 766 - -
Prci2g2636 854 SUPERFAMILY Periplasmic binding protein-like I 88 395 IPR028082 -
Prci2g2636 854 FunFam Glutamate receptor 95 253 - -
Prci2g2636 854 PIRSF IGluLR_plant 87 851 IPR017103 -
Prci2g2636 854 PIRSF IGluLR_plant 1 91 IPR017103 -
Prci2g2636 854 Gene3D - 301 405 - -
Prci2g2636 854 Pfam Receptor family ligand binding region 88 346 IPR001828 -
Prci2g2636 854 Pfam Bacterial extracellular solute-binding proteins, family 3 457 760 IPR001638 -
Prci2g2636 854 CDD GluR_Plant 403 759 - -
Prci2g2636 854 Gene3D - 93 252 - -
Prci2g2636 854 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 34 811 IPR015683 -
Prci2g2636 854 FunFam Glutamate receptor 304 403 - -
Prci2g2636 854 FunFam Glutamate receptor 528 658 - -
Prci2g2636 854 Gene3D - 528 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2636 Prci-Chr2 23935323 23940110 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2636 24 832 Ion Channels AT2G29120 41.590 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2636 K05387 - qsa:O6P43_019176 847.04