Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2629 ATGAGGAAAGGCAGAGCAGCTGCGCAGGTGAAGACGGCGACTGAGGCGGCGGCGGCGGTTGGGGTGGACGGATCCGGATCGAGGACTGTTTTAAAAGAGCCGAGGTACCGGGGCGTGAGGAAGAGGCCGTGGGGTAGATTTGCGGCGGAGATCAGAGACCCTGTTAAGAAAGCTCGTGTGTGGCTCGGCGCCTTCGATTCGGCCGAAGAAGCCGCTCGAGCTTACGACGCCGCCGCTCTCAGCCTGCGTGGACCTAAGGCTAAGACCAACTTTCCGATCAACTCTTCTTCTCTCTCACGCTTCTGTTACCACCATAACAATAACAACCCCGCCGATCCGTTTTTAGATCACAGGTTGTATGCTTCTAATGACTTCCAGGAGCACCAGATCAATCCTCAGAGACCTACTTCCAGCGGCATGAGCAGCACCGTCGAGTCCTTCAGCGGCCCTCGCCCTCGCTCAGCGGCGCCGCCGTTGATCAAAACCACCGCCCCCCGGAGATACCCTCGGACGCCGCCCGTCGTGCCAGAGGATTGCCACAGCGACTGCGATTCATCGTCGTCTGTGGTTGACAACGACGGCGATGATATCGCGTCGTCCTCTTTCCGGCGGCCTTTCCCCTTCGATCTTAACTTCCCACCGGTCGATGAAGATCTTCACTGCACCGATCTGCGCCTCTGA 681 0.5888 MRKGRAAAQVKTATEAAAAVGVDGSGSRTVLKEPRYRGVRKRPWGRFAAEIRDPVKKARVWLGAFDSAEEAARAYDAAALSLRGPKAKTNFPINSSSLSRFCYHHNNNNPADPFLDHRLYASNDFQEHQINPQRPTSSGMSSTVESFSGPRPRSAAPPLIKTTAPRRYPRTPPVVPEDCHSDCDSSSSVVDNDGDDIASSSFRRPFPFDLNFPPVDEDLHCTDLRL 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2629 226 SMART rav1_2 35 98 IPR001471 GO:0003700|GO:0006355
Prci2g2629 226 MobiDBLite consensus disorder prediction 129 194 - -
Prci2g2629 226 ProSiteProfiles AP2/ERF domain profile. 35 92 IPR001471 GO:0003700|GO:0006355
Prci2g2629 226 SUPERFAMILY DNA-binding domain 35 94 IPR016177 GO:0003677
Prci2g2629 226 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 18 194 - -
Prci2g2629 226 Gene3D AP2/ERF domain 35 94 IPR036955 GO:0003700|GO:0006355
Prci2g2629 226 CDD AP2 34 94 IPR001471 GO:0003700|GO:0006355
Prci2g2629 226 FunFam Ethylene-responsive transcription factor 2 35 94 - -
Prci2g2629 226 PRINTS Ethylene responsive element binding protein signature 58 74 IPR001471 GO:0003700|GO:0006355
Prci2g2629 226 PRINTS Ethylene responsive element binding protein signature 36 47 IPR001471 GO:0003700|GO:0006355
Prci2g2629 226 MobiDBLite consensus disorder prediction 129 149 - -
Prci2g2629 226 Pfam AP2 domain 34 84 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2629 Prci-Chr2 23801701 23802954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2629 1 226 AP2-EREBP Transcription Factor Family AT3G20310 57.874 7.79e-65 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci2g2629 AP2 3.2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2629 K09286 - cpap:110820856 249.595