LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci2g2627	ATGTTTTCTCTAAGCTCCTGGCATCTCCTCTTTCCTCTCTATTTCAGCATTCTTGTTATTCAGACACACTGCGATGATCGAAAGACGTTTGTCGTGTACATGGGGGATCTCCCCAAGGAAATGGAAGTCACAGAATCCCATCACACGAGTCTCGTTCAACAAGTCCTTGGCAGAAACTTTGCACCACAAGCTTTGCTCCACAGCTACAAGAAGAGTTTCAATGGATTTGCGGTGAGGCTAACACAAGAGGAAGCCAAAAAAGTGGCTGGAATGGAGGGGGTAATCTCTATGTTCCAAAGCAAAAGGCACAAGGCCCAAACGACGAGGTCGTGGGACTTCCTAGGTTTCCCACAGCAAGTGAAAAGAACAAGTTTGGAGAGTGATATCATTGTTGGAGTAATCGATTACGGAATTTGGCCAGAGTCTGACAGCTTCAATGATCAAGGTTTCGGTCCACCACCCAAAAAATGGAAGGGGTCATGCCAAAACATCACTTGCAATAACAAAATAGTAGGAGCAAAATACTTTCCATCCCTTAAGGATATAAAAAAGGATGATATTATATCTCCAAGGGATGCGAGTGGACATGGGACTCATTGTGCATCCATCGTAGCAGGAAACTGGGTTAACTCAGCGAGTCAGTCTGGACTAGGCTTAGGCACTGCAAGAGGGGGAGTCTCATCAACTCGTATTGCTACATACAAACCCTGTTGGTCATTAGGTTGTGAGGAAGCTGACATTCTCAAAGCATTCGATGAAGCAATCTCTGACGGTGTTGACATAATTTCCATATCACTTGGTCCTTCCAAAGTCAAGTTCCTTCCCTATTTTGAGGATGTTTATGCAATAGGGGCTTTCCATGCAATGAAGAACGGAATTTTAACGTCAATTGCTGCCAACAACTTGGGTCCAAATTTGTTCACCATGACTACTTTTACTCCTTGGTCGCTTTTAGTGGCAGCTTCTACAACTGACAGAAAGTTTTTCACTCAAGTTCAGTTGGGAAATGGCAAGATTTTTGAGGGCGTTTCGTTGAATACATTTGATCTTCACAATAAAAAGTACCCATTGATTTACTCTGGAGATGCACCAAATATCACCGGTGGATTTAACAATTCCAAATCAAGGTATTGTATTGAAAACTCATTGAATGAAGCGATGGTGAAGGGAAAAATTGTCTTGTGTGATAGTTTTCCAATGGATGTGAGACTAGTATCTGTGGTGGCTGGTTTTGTGGTTCCAACCATTTCCGCAAAAGATGCAGCATCTCTTTTTTCTTTCCCTCTTCCTCTTGCTGTGCTTACTCTAAATGATCGCAAACCCATTCGCTCTTACTCTAAATATGCTAGCAATCCAACTGTTACTATATATAAGAGTCGTGAAGGTAAAGATTCTCTTTCCCTTTACGTAGTATCCTTTTCTTCAAGGGGTCCGAATCCAATTACTCCTAATATTCTTAAGCCTGATATAACTGCCCCAAGTGTAGATATCTTAGCTGCTTGGCCTCCTGAGTCCCCTCTCCTTAAGGTGAAGAGAGACAAGAGACAATCAAACTTCAAGATAATATCTGGAACTTTCATGGCTTGTCCTCATGCTTCTGCTGCAGCTGCTTACATCAAATCTTTTCACCCCACTTGGTCCCCAGCTGCAATCATGTCTGCCCTAATAACCACTGCTACTCCCATGAATCCTAAGCTCAGCCCAGAAGCTGAATTTGCATACGGAGCTGGACAAATCAATCCCATTAAGGCAGTGACTCCTGGATTGGTATATGATATTAGTGAATATGATTATGTGAGGTTCTTGTGTGGACAAGGTTATGATACAAAAATATTGCGAAACATTACAGATGATGACATCAACTGTAAGAAAATTAAGCATGAAAAAGTAAGGGATCTCAATCTCCCATCTTTTGCTCTTAAGACAAACATATCAAAACCTTTGAAGGCAGATGTTGGGGCAAATGTTGGGGCAGCTATGTCTATATACAAGGCTAAATTGATTGTTCCTTCATCTCTGTTAACTATTCAAGTGACACCAGATGTTCTGTCATTCTCTTCTGTTGGGGAGAAGAAGTCTTTCATAGTGACCATTGAAGGCAGCATAAATGTGATTATAGTCTCTACTTCATTGATTTGGGATGATGGCAATGTCCAAGTAAGGAGCCCTATTGTAGTGTATGATCTTGGTTGA	2193	0.4172	MFSLSSWHLLFPLYFSILVIQTHCDDRKTFVVYMGDLPKEMEVTESHHTSLVQQVLGRNFAPQALLHSYKKSFNGFAVRLTQEEAKKVAGMEGVISMFQSKRHKAQTTRSWDFLGFPQQVKRTSLESDIIVGVIDYGIWPESDSFNDQGFGPPPKKWKGSCQNITCNNKIVGAKYFPSLKDIKKDDIISPRDASGHGTHCASIVAGNWVNSASQSGLGLGTARGGVSSTRIATYKPCWSLGCEEADILKAFDEAISDGVDIISISLGPSKVKFLPYFEDVYAIGAFHAMKNGILTSIAANNLGPNLFTMTTFTPWSLLVAASTTDRKFFTQVQLGNGKIFEGVSLNTFDLHNKKYPLIYSGDAPNITGGFNNSKSRYCIENSLNEAMVKGKIVLCDSFPMDVRLVSVVAGFVVPTISAKDAASLFSFPLPLAVLTLNDRKPIRSYSKYASNPTVTIYKSREGKDSLSLYVVSFSSRGPNPITPNILKPDITAPSVDILAAWPPESPLLKVKRDKRQSNFKIISGTFMACPHASAAAAYIKSFHPTWSPAAIMSALITTATPMNPKLSPEAEFAYGAGQINPIKAVTPGLVYDISEYDYVRFLCGQGYDTKILRNITDDDINCKKIKHEKVRDLNLPSFALKTNISKPLKAAXVGANVGAAMSIYKAKLIVPSSLLTIQVTPDVLSFSSVGEKKSFIVTIEGSINVIIVSTSLIWDDGNVQVRSPIVVYDLG	731

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci2g2627	731	Gene3D	-	325	463	-	-
	Prci2g2627	731	Pfam	Peptidase inhibitor I9	29	101	IPR010259	-
	Prci2g2627	731	Gene3D	Peptidase S8/S53 domain	128	598	IPR036852	GO:0004252\|GO:0006508
	Prci2g2627	731	ProSitePatterns	Serine proteases, subtilase family, histidine active site.	196	206	IPR022398	-
	Prci2g2627	731	PRINTS	Subtilisin serine protease family (S8) signature	523	539	IPR015500	-
	Prci2g2627	731	PRINTS	Subtilisin serine protease family (S8) signature	192	205	IPR015500	-
	Prci2g2627	731	PRINTS	Subtilisin serine protease family (S8) signature	126	145	IPR015500	-
	Prci2g2627	731	SUPERFAMILY	Subtilisin-like	106	589	IPR036852	GO:0004252\|GO:0006508
	Prci2g2627	731	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	17	105	IPR037045	-
	Prci2g2627	731	Pfam	Fibronectin type-III domain	632	727	IPR041469	-
	Prci2g2627	731	Gene3D	-	602	730	-	-
	Prci2g2627	731	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	53	727	IPR045051	-
	Prci2g2627	731	CDD	Peptidases_S8_3	103	560	IPR034197	-
	Prci2g2627	731	CDD	PA_subtilisin_like	332	456	-	-
	Prci2g2627	731	Pfam	Subtilase family	127	577	IPR000209	GO:0006508\|GO:0008236
	Prci2g2627	731	ProSiteProfiles	Serine proteases, subtilase domain profile.	110	585	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci2g2627	Prci-Chr2	23649079	23652911	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci2g2627	26	730	Subtilisin-like Serine Gene Family	AT5G59100	47.083	0.0	616

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci2g2627	-		-	gmx:100801111	912.138