Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2579 ATGAAGGAAAAGGGACAACTAGTTTTTCCCATTTTTTATGATGTGGATCCTTCTGAAGTGAGACGTCAAAAAGGGAATTACGGACAAGCAATGACTATGCATGAACATAATTTAAGGACTTGTGAAGAGAGGATACAAATGTGGAAGGTTGCACTATTTGAAGTAGCCAATCTTTCTGGCATATGTCTCGATCCTAGGCACGATTATGAATATGAAATCATTGAAGTGATTGTGAAAGAAATACTGTGCAGAATCAATAAGGTTCCTTTACATGTTGCAGAATATCCAATTGGATTAGATAATCATATGGATGAATTATACTCTCTATTACAACGTGGGACTAATGATCAGGCCATTATGGTAGGAATTTATGGAATTGGGGGAATAGGTAAAACCACATTAGCACGCAAATTATACAACTCAATAGCACATAGTTTTGAAGGTTTGTGTTTTCTCCATGATATCAAAGAAAATTCAAGGAAATATGGATTAGAAAGAATGCAAGAGAGAATGCTTTCAAAGATTTTAGGAGTGGACATAAAAATTGATGACGTTAATGAAGGAGTTGCAATAATTAAAGAGAGATTTAGACGAAAGACAATTTTGTTGATTCTTGATAATGTTGATGAACAAGAGCAATTACAAAAATTTGCTGGCCATTGTGGCTGGTTTGGTTCTGGGAGTATAATCATTATAACAACAAGGGACAAACATTTACTTAAAAGACATGGGGTTGAAAGAACATATGAGATGGAGGCACGCACTGATGAAGAATCTCTTCAATTATTAATTTGGAATGCCTTCAAAAATACACAAGTAGGTCCAAGTTATAATGAAGTCATGGATCGTGTGATACCCTATGCCCATGGTCTTTTATTAGCAAAAACAGAACCAGAACCCCCGATTTCAAAAGAGCAACCAATGCTAAAAAAGAGGCGGTTGGTGGAAGATAACCATATTATTTCAGATTCCATCGGTGTTGACCAAGAAACAGAAGAAGAAACCCATGTTTCAAGTAAGAAGGATTTCCATGGCAATACTCTACTACTACAAGAAATTGAATACGAAAGCCAAAAGCAAACAATAGACATTCAATCTCCAAGTACAGAAAATGAAGAATCAGTTCGAGTAAGGAGGCCAAGTAAGAATATGACACATCAACAAGATGAAGCTTCAATCAATGATCAAATCACGGAGAGCTTTGAAAATGTCATAAGTGGCAGAGGAAAAGACATGGTACTCTACAAAAATGATCCCATTAATGGCAACAATATAACAAAGATGATCGGACAAGACTACGTATATGACTCAAATAGCAAAAGCAGCATGACATGGGATCCAATGGAATGTGAATATGAAGAAATAAGTCATAATAATAATAAGGATCCACATGAGCAGAGAAGAGATCATCCATGGTTTTTGTGTTTTAATCTATTGACTTTCGTAGCCTCGCTCTGTTCTTCTTCTTAA 1470 0.3571 MKEKGQLVFPIFYDVDPSEVRRQKGNYGQAMTMHEHNLRTCEERIQMWKVALFEVANLSGICLDPRHDYEYEIIEVIVKEILCRINKVPLHVAEYPIGLDNHMDELYSLLQRGTNDQAIMVGIYGIGGIGKTTLARKLYNSIAHSFEGLCFLHDIKENSRKYGLERMQERMLSKILGVDIKIDDVNEGVAIIKERFRRKTILLILDNVDEQEQLQKFAGHCGWFGSGSIIIITTRDKHLLKRHGVERTYEMEARTDEESLQLLIWNAFKNTQVGPSYNEVMDRVIPYAHGLLLAKTEPEPPISKEQPMLKKRRLVEDNHIISDSIGVDQETEEETHVSSKKDFHGNTLLLQEIEYESQKQTIDIQSPSTENEESVRVRRPSKNMTHQQDEASINDQITESFENVISGRGKDMVLYKNDPINGNNITKMIGQDYVYDSNSKSSMTWDPMECEYEEISHNNNKDPHEQRRDHPWFLCFNLLTFVASLCSSS 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2579 489 Gene3D - 81 247 IPR027417 -
Prci2g2579 489 Pfam NB-ARC domain 100 292 IPR002182 GO:0043531
Prci2g2579 489 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 294 IPR044974 GO:0006952
Prci2g2579 489 ProSiteProfiles TIR domain profile. 1 85 IPR000157 GO:0007165
Prci2g2579 489 Pfam TIR domain 3 81 IPR000157 GO:0007165
Prci2g2579 489 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 294 IPR027417 -
Prci2g2579 489 PRINTS Disease resistance protein signature 195 209 - -
Prci2g2579 489 PRINTS Disease resistance protein signature 120 135 - -
Prci2g2579 489 MobiDBLite consensus disorder prediction 358 390 - -
Prci2g2579 489 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 60 IPR035897 -
Prci2g2579 489 Gene3D - 1 80 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2579 Prci-Chr2 22405399 22408535 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2579 6 263 WRKY Transcription Factor Family AT4G12020 30.303 4.34e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2579 - - pcin:129302181 973.77