Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2573 ATGACAGGACGAGCATCAACCTCTTCTTCATTCCAATATCATTTCACCTATGATGTTTTTCTCAATTTTAGAGGTGAAGATACTCGTCATGGTTTTACAGGAAGTCTTTATCATGCTCTAACTCAAAAGGGAGTTTACACCTTCTTTGATGATGAGGAAATAAGAAAAGGAAATAAAATTACACCAACACTCCTCCAAGCAATCGAAGAATCTAGGATTGTCATTTGTGTATTTTCTAAGAACTATGCTTTCTCAAGATATTGCCTCGACGAACTCATTCTGATCTGTCAGAATATGAAGGAAAAGGGACAACTAGTTTTTCCCATTTTTTATGATGTGGATCCTTCTGAAGTGAGACGTCAAAAAGGGAATTACGGACAAGCAATGACTATGCATGAACATAATTTAAGGACTTGTGAAGAGAGGATACAAATGTGGAAGGTTGCACTATTTGAAGTAGCCAATCTTTCTGGCATATGTCTCGATCCTAGGCACGATTATGAATATGAAATCATTGAAGTGATTGTGAAAGAAATACTGTGCAGAATCAATAAGGTTCCTTTACATGTTGCAGAATATCCAATTGGATTAGATAATCATATGGATGAATTATACTCTCTATTACAACGTGGGACTAATGATCAGGCCATTATGGTAGGAATTTATGGAATTGGGGGAATAGGTAAAACCACATTAGCACGCAAATTATACAACTCAATAGCACATAGTTTTGAAGGTTTGTGTTTTCTCCATGATATCAAAGAAAATTCAAGGAAATATGGATTAGAAAGAATGCAAGAGAGAATGCTTTCAAAGATTTTAGGAGTGGACATAAAAATTGATGACGTTAATGAAGGAGTTGCAATAATTAAAGAGAGATTTAGACGAAAGACAATTTTGTTGATTCTTGATAATGTTGATGAACAAGAGCAATTACAAAAATTTGCTGGCCATTGTGGCTGGTTTGGTTCTGGGAGTATAATCATTATAACAACAAGGGACAAACATTTACTTAAAAGACATGGGGTTGAAAGAACATATGAGATGGAGGCACGCACTGATGAAGAATCTCTTCAATTATTAATTTGGAATGCCTTCAAAAATACACAAGTAGGTCCAAGTTATAATGAAGTCATGGATCGTGTGATACCCTATGCCCATGGTCTTTTATTAGCAAAAACAGAACCAGAACCCCCGATTTCAAAAGAGCAACCAATGCTAAAAAAGAGGCGGTTGGTGGAAGATAACCATATTATTTCAGATTCCATCGGTGTTGACCAAGAAACAGAAGAAGAAACCCATGTTTCAAGTAAGAAGGATTTCCATGGCAATACTCTACTACTACAAGAAATTGAATACGAAAGCCAAAAGCAAACAATAGACATTCAATCTCCAAGTACAGAAAATGAAGAATCAGTTCGAGTAAGGAGGCCAAGTAAGAATATGACACATCAACAAGATGAAGCTTCAATCAATGATCAAATCACGGAGAGCTTTGAAAATGTCATAAGTGGCAGAGGAAAAGACATGGTACTCTACAAAAATGATCCCATTAATGGCAACAATATAACAAAGAAACCTTATTCACATGATTTGCATTACAACTAG 1608 0.3563 MTGRASTSSSFQYHFTYDVFLNFRGEDTRHGFTGSLYHALTQKGVYTFFDDEEIRKGNKITPTLLQAIEESRIVICVFSKNYAFSRYCLDELILICQNMKEKGQLVFPIFYDVDPSEVRRQKGNYGQAMTMHEHNLRTCEERIQMWKVALFEVANLSGICLDPRHDYEYEIIEVIVKEILCRINKVPLHVAEYPIGLDNHMDELYSLLQRGTNDQAIMVGIYGIGGIGKTTLARKLYNSIAHSFEGLCFLHDIKENSRKYGLERMQERMLSKILGVDIKIDDVNEGVAIIKERFRRKTILLILDNVDEQEQLQKFAGHCGWFGSGSIIIITTRDKHLLKRHGVERTYEMEARTDEESLQLLIWNAFKNTQVGPSYNEVMDRVIPYAHGLLLAKTEPEPPISKEQPMLKKRRLVEDNHIISDSIGVDQETEEETHVSSKKDFHGNTLLLQEIEYESQKQTIDIQSPSTENEESVRVRRPSKNMTHQQDEASINDQITESFENVISGRGKDMVLYKNDPINGNNITKKPYSHDLHYN 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2573 535 Gene3D - 15 182 IPR035897 -
Prci2g2573 535 Pfam TIR domain 17 179 IPR000157 GO:0007165
Prci2g2573 535 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 392 IPR044974 GO:0006952
Prci2g2573 535 SMART till_3 16 156 IPR000157 GO:0007165
Prci2g2573 535 MobiDBLite consensus disorder prediction 456 488 - -
Prci2g2573 535 Pfam NB-ARC domain 198 390 IPR002182 GO:0043531
Prci2g2573 535 Gene3D - 183 347 IPR027417 -
Prci2g2573 535 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 185 - -
Prci2g2573 535 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
Prci2g2573 535 PRINTS Disease resistance protein signature 293 307 - -
Prci2g2573 535 PRINTS Disease resistance protein signature 218 233 - -
Prci2g2573 535 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 392 IPR027417 -
Prci2g2573 535 ProSiteProfiles TIR domain profile. 15 183 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2573 Prci-Chr2 22405054 22408539 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2573 11 361 WRKY Transcription Factor Family AT4G12020 27.374 1.30e-30 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2573 - - pcin:129302181 1038.1