Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2572 ATGGAGGAAGGAACAATGAAAGAACCAATAAACGCGGGCACCAAGCAAAAGGAGAAGATAAAAGTTGGGCCATTTTTAGTTTCTCCTCCACCGAATGAACGCGAATTGCAGTTGATACAATTTGTTTTCAACCCTTCATGGGACGAGTATCTGGTTTTTTCTTCATCACATTCATTTTTGGATAAATATGCCTTTACCACACTTAAACCACGGACTTGCTTGAATCCACTGGTGATAGATGCTTTTGTTGAGATCTTTACTGACATTGAACGAAAGGAAAAAGCTAATCCTCGTCATTGGTATCTTCCGGTGTCATTTTCGAGAATAGCAGATGGTGGCTACGTAAGCTACTTCCTCGACTTTGTCAAACGGAATAATATAAAAGAAAACTACATGTCTGATCACTTGGTTGACTGTGAAAAGATATTCATTCCGGTTCATGTTGGGCAAAAGTTAGATGGACATTTTTATTTATACATTATTGATTTAAAGAATAAATTGGTTGAAATATGGGATTCTTTATTGGGTGATGAATATATGACTAAAATAGAACGTGACGAGACAACTCAAAATTTGCTGATTGCCATGGAAAATCTCTTCAAGGATACTACGTTCACAAAATTTGATCAGACGATGGCGAATAATATTCCATTACAGTCCAACAAGTATGATAGTGGCATATTCGTTATTAACTTTATGCAACAAATGATTCATTCAATTCAGGTTAACAGCAATGAAGGACGGCTGAATCTAGCTCTACAGTTACTTAACAGTAACTTGAATAAGGAAAAAGCAAATCTATATTGCAAAGCAGAAAGTTCACAAGTAAAAGCAAAAGAAGATTCATATATGTCTCGAGTTAAGAGAAGGCGTGCTAGCCCTGAAAATGTTGGAAGAGAGGCATATATAGAATTGGATGGTTCTAATAGAAAAGTTAAGAGAGACCATGTTGATTTGATAACAGGATGTTCTAAAGGTTACGTATTACCAGCAACAAATTTAGTAGGGGAAGAGTTTCAAGAATATATTGAACAAATATGGAAGTGGATAATCGAAGATAAGGCGTCAGCAATTGGGATATGGGGAATGGGAGGGGTGGGGAAAACAGCTTTAGCAACTCATATCCATAACAAGCTTTTAGAAGAAGTAAGTGGTGACTTTGATCATGTCATTTGGGTAACTGCATCACAACATCAAAGCATTTGCCAGTTGCAAAAAGTTGTGGCTGCATCAATTGATTTGGACATATCTAATGAGTATGAGGTTAAAAGAATTGCTGGCAAATTATTCCAAGCATTCAAACATATGAATAGATATGTTCTTATTTTTGATGATATTTGGGATCCTATTTTTCTAGAGGAGGTCGGATTACCTACTTCATATAACCAAATTACATTGATTTTGACAACCCGTTCATTGGAAGTATGTCAAGTCATGAATTGCAAGAATATCATAAAAGTAGAACCTCTCCGGGACATTGATAGTTGGGCTTTGTTTGAAAAGACTATGGGAGTCAATGAAGGATTGTCATTGGAAGTTGAGAAGATAGCACAGGATATTACAAATAAATGTGAAGGATTGCCCCTTGCTATTGTTATAATTGGAAGAAGCATGAGGGGGAAAGAACATCAAATATTGTATTGGAACCATATCTTGAGCTGCCTTCAAGGAATGGAGGATTGGCAATATGATTTGAACAAATGGGTATTTCCTGTTCTGAGATCTAGTTATGCTCGGCTAATAAATAATAAATTACAAGAATGTTTTTTGTACTGGGCCTCACAAACTGATGAAGATGATTCTGGCCTGAATTGTCGAAATGTGATAAGAAGATTTATCTATATGGGATGGATCGATGGAATGAAGTTGATAAATAAGTATGAGGAAGGTTACAACATATTGGATAAATTAAGGAAGAATAGTCTATTGGAAGACCCATTATTATTGCGACCAAGATGGGGAATGCACAATTTACTCAAGATGATGGCTATAGGTATTGCAAAAGAGAATGATAAAATCATGGCAAAAGCTCAACTGAAATTGAACAAAATACCGGAGGATAACTTGTGGAAAGAAGATTTGGAAAAAGTATTTTTGACAGGAAATAATATACAAAATATACCAGTTGGCATATCTCCAAGATGTTCTCAACTTTCAATGCTTCTTTTAAATTGTAATACTACTCTTGAATGGATTTCAGACGATTTTTTCAACAACATGCCTGCTCTTAAAGTTCTTGATTTGTCTGAGACAGGTATTGAGTGCTTGCCAAACTCTATATCCAACTTGAGATGCCTCATTACATTATTAATCTCAGGATGTGAAAGATTGAGGTATGTACCTTCATTAGGAAAGCTACAAGGGCTCATATCATTGGACCTTTCATCTACTGCCATCACTGAAGCACCATCAGGCTTGGAATCATTGGAGAATTTTAAACATCTAAACCTACAAGACACAAAAGAGTTAAAAATGTCAACTTCAATGATATCCAAAATGACCAATCTACAATCTCTTGAGCTTAATAACTGGACTCCGAACTTAATAGAAGTTAATGCACAAGATCTACAAGGTTTAGACAAATTAGAAGCTATTACAGTCAATTTTTGTGACATCAACCAATTCAATGCTTATGTGAGTAGTTTACAAGTTAAAGATTCTGCACTTGAAACCTTTTCTCTAACTTTATCAAAGACAAAAGAATACCCCAATGATATGGTTGAAGATTTTGAAATGCAGTTAGAAGGAATCGACCCCTACCCCAGTCAAATGGTAACTTTTATGGACATAGATTTGGGAGCTAGTGTAGTGATGCTACCAGAAAATATCAGGCAGTTGTTTATATGCGAGTGTCACACTGGGCAATGGAATGAATATCCCGCATGCCGTGTCTTATCATTTTGTAATAATGATAATCTACACCGAATTGACACTTTGGATATTAGGAGTTGCGATGAGTTGGAGTGCTTGTGTTGTTACTCTACTAGTTGCTGCTTTTGCTCCTCCGTTAATCTCTTTGGGGATCTAACCCTCGAAGATTTAAAGGACTTGAAAGATATTGTGTCACCACTTGCTCCATCCTTGCATCTACCCACCATCCCCATCTTATTTTCTAATCTCAAATCTCTCTATATTACCAGATGTCACAGTATGACGATTGTACTGATACCTGAGTTATTAGCACAGCTCCGAAGTTTGGAGTTCATCAATGTGGGGTTTTGTAACTCCATGAGAGAAATTGTTGGAGAGGATCATCGCCTTTCGTGCCCTACTTTAACTCTTCCCAAATTGATCACAATGCAAATGTGGGAACTACCAGAATTGAAGTTCGTGTACAAAGAGATCCTGTACTGTCCTTCTCTCAGGAAATTTTTTGCCTCCGACTGTGATGAATTAAGTCACCCTCAGATACAGATAAATGAAAATGCACTGCAGATGGAGAAGAACCAATATTATGGACGATACTATTGGTCCATTTATTAA 3483 0.3649 MEEGTMKEPINAGTKQKEKIKVGPFLVSPPPNERELQLIQFVFNPSWDEYLVFSSSHSFLDKYAFTTLKPRTCLNPLVIDAFVEIFTDIERKEKANPRHWYLPVSFSRIADGGYVSYFLDFVKRNNIKENYMSDHLVDCEKIFIPVHVGQKLDGHFYLYIIDLKNKLVEIWDSLLGDEYMTKIERDETTQNLLIAMENLFKDTTFTKFDQTMANNIPLQSNKYDSGIFVINFMQQMIHSIQVNSNEGRLNLALQLLNSNLNKEKANLYCKAESSQVKAKEDSYMSRVKRRRASPENVGREAYIELDGSNRKVKRDHVDLITGCSKGYVLPATNLVGEEFQEYIEQIWKWIIEDKASAIGIWGMGGVGKTALATHIHNKLLEEVSGDFDHVIWVTASQHQSICQLQKVVAASIDLDISNEYEVKRIAGKLFQAFKHMNRYVLIFDDIWDPIFLEEVGLPTSYNQITLILTTRSLEVCQVMNCKNIIKVEPLRDIDSWALFEKTMGVNEGLSLEVEKIAQDITNKCEGLPLAIVIIGRSMRGKEHQILYWNHILSCLQGMEDWQYDLNKWVFPVLRSSYARLINNKLQECFLYWASQTDEDDSGLNCRNVIRRFIYMGWIDGMKLINKYEEGYNILDKLRKNSLLEDPLLLRPRWGMHNLLKMMAIGIAKENDKIMAKAQLKLNKIPEDNLWKEDLEKVFLTGNNIQNIPVGISPRCSQLSMLLLNCNTTLEWISDDFFNNMPALKVLDLSETGIECLPNSISNLRCLITLLISGCERLRYVPSLGKLQGLISLDLSSTAITEAPSGLESLENFKHLNLQDTKELKMSTSMISKMTNLQSLELNNWTPNLIEVNAQDLQGLDKLEAITVNFCDINQFNAYVSSLQVKDSALETFSLTLSKTKEYPNDMVEDFEMQLEGIDPYPSQMVTFMDIDLGASVVMLPENIRQLFICECHTGQWNEYPACRVLSFCNNDNLHRIDTLDIRSCDELECLCCYSTSCCFCSSVNLFGDLTLEDLKDLKDIVSPLAPSLHLPTIPILFSNLKSLYITRCHSMTIVLIPELLAQLRSLEFINVGFCNSMREIVGEDHRLSCPTLTLPKLITMQMWELPELKFVYKEILYCPSLRKFFASDCDELSHPQIQINENALQMEKNQYYGRYYWSIY 1160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2572 1160 ProSiteProfiles Ubiquitin-like protease family profile. 58 236 IPR003653 GO:0006508|GO:0008234
Prci2g2572 1160 Gene3D Adenoviral Proteinase; Chain A 28 260 - -
Prci2g2572 1160 PRINTS Disease resistance protein signature 433 447 - -
Prci2g2572 1160 PRINTS Disease resistance protein signature 357 372 - -
Prci2g2572 1160 PRINTS Disease resistance protein signature 524 538 - -
Prci2g2572 1160 PRINTS Disease resistance protein signature 738 754 - -
Prci2g2572 1160 Gene3D Ribonuclease Inhibitor 935 1149 IPR032675 -
Prci2g2572 1160 Pfam NB-ARC domain 341 559 IPR002182 GO:0043531
Prci2g2572 1160 FunFam Probable disease resistance protein At1g61300 327 483 - -
Prci2g2572 1160 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 339 591 IPR027417 -
Prci2g2572 1160 Pfam Leucine rich repeat 717 774 IPR001611 GO:0005515
Prci2g2572 1160 Gene3D Ribonuclease Inhibitor 785 913 IPR032675 -
Prci2g2572 1160 Pfam Ulp1 protease family, C-terminal catalytic domain 126 244 IPR003653 GO:0006508|GO:0008234
Prci2g2572 1160 Gene3D - 490 580 IPR042197 -
Prci2g2572 1160 SUPERFAMILY Cysteine proteinases 29 257 IPR038765 -
Prci2g2572 1160 SUPERFAMILY L domain-like 688 1134 - -
Prci2g2572 1160 Gene3D Ribonuclease Inhibitor 668 784 IPR032675 -
Prci2g2572 1160 Gene3D - 326 488 IPR027417 -
Prci2g2572 1160 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 315 1133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2572 Prci-Chr2 22225374 22242666 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2572 358 543 WRKY Transcription Factor Family AT5G45050 22.798 1.50e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2572 - K13459 pcin:129318814 560.066