Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2562 ATGGTTATGGCCATGCTGAATTGGATACCCGTCGCTGCAAAGAACTTAGCTCACGAGCACGCACAGGGATGTATTGCTGGAATGATACTCTTGTTCATCACCAAGGGGAAGAGTTCTCGCATCCTTACATTTGATGAAGAACTATTCTTCATATATCTCCTGCCACCCATAATATTCAATGCTGGATTTCAGGTCAAGAAGAAACAGTTCTTCCACAACTTCTTAACTATCATGCTATTTGGGGTGATCGGTGTTTTTATATCGGCATCTATTGTTGTATCTGGCAGCTGGTGGCTTTTCCCCAAGTTGAACTTTATTGGTCTGACTGTGCAAGATTATCTTGCTATAGGAACAATTTTCTCTTCAACAGATACTGTTTGTACCTTGCAGGTTCTCAATCAAGATGAAACTCCTCTATTATACAGCCTAGTCTTTGGAGAAGGAGTGGTAAATGATGCAACGTCAGTTGTTCTCTTCAATGCAGTTCGGAAGCTTGATGCTTCAAAAGTTAATGGCAGGGCACTCCATGTCATGGGAGATTTCTTGTATCTGTTCTCCACAAGCACTGCCCTTGGATTCATTGCTGGACTTCTCACTGCATACATCCTGAAAGCCTTATGCTTTGGAAGACATTCAAGTGTTCGTGAAATTGCATTGATGGTTTTAATGGCATACCTATCCTACATGTTAGCAGAGCTACTAGGACTTAGTGGAATCCTCACTGTTTTCTTTTGCGGACTACTAATGTCTCACTATGCATGGCATAATGTGACTGAAACTTCCAGAGTCACAACCAGGCATGTCTTTGCGACAATGTCATTCATTGCAGAAACTTTTATATTTCTTTATGTGGGCATGGATGCTCTGGACATGGAGAAGTGGAGGATTACCAACTTAAGTTTTTGGAGTTTGATGGGAATTTACAGCTGCTTAATCTTCCTGATATTAATTGGAAGGGCTGCATTTGTTTTTCCTCTCTCCGCTTTAGCAAATTGTTTGAATAGGCGTGCTCACAGAGACTCAAGAATCACATTCAGGCACCAGATAATCATTTGGTGGGCTGGACTTATGAGGGGGGCAGTCTCCATTGCTCTGGCTTTCAAACAATTCACATATTCTGGTGTTACATTTGATCCTGTTGATGCAACAATGATCACCAACACCATCATTGTTGTGCTTTTCAGCACGCTGGTGTTTGGCATTCTCACAAAACCACTTATCCGTTATCTTCTTCCCCATAGCTCGACAAGGAAGAACATCGCTCATCAGGAGTCCAGTCCACCTATTGAGGACTTGAATCTGCCATTGTTGTCCTTCGAGGAGTCTACAGCAACCAACATCAGCCGGGCAAAGGAAAGTCTATCAATGTTGATGGAAAGTCCCGTACACACCATACATCATTATTGGAGGAAGTTTGATGATGCCTACATGAGACCCGTATTTGGAGGCCCTCTTGCTTAG 1461 0.4264 MVMAMLNWIPVAAKNLAHEHAQGCIAGMILLFITKGKSSRILTFDEELFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMLFGVIGVFISASIVVSGSWWLFPKLNFIGLTVQDYLAIGTIFSSTDTVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAVRKLDASKVNGRALHVMGDFLYLFSTSTALGFIAGLLTAYILKALCFGRHSSVREIALMVLMAYLSYMLAELLGLSGILTVFFCGLLMSHYAWHNVTETSRVTTRHVFATMSFIAETFIFLYVGMDALDMEKWRITNLSFWSLMGIYSCLIFLILIGRAAFVFPLSALANCLNRRAHRDSRITFRHQIIIWWAGLMRGAVSIALAFKQFTYSGVTFDPVDATMITNTIIVVLFSTLVFGILTKPLIRYLLPHSSTRKNIAHQESSPPIEDLNLPLLSFEESTATNISRAKESLSMLMESPVHTIHHYWRKFDDAYMRPVFGGPLA 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2562 486 PANTHER SODIUM/HYDROGEN EXCHANGER 23 481 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Prci2g2562 486 Gene3D - 109 161 - -
Prci2g2562 486 Pfam Sodium/hydrogen exchanger family 23 407 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Prci2g2562 486 PRINTS Na+/H+ exchanger signature 48 59 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Prci2g2562 486 PRINTS Na+/H+ exchanger signature 62 76 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Prci2g2562 486 PRINTS Na+/H+ exchanger signature 117 127 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Prci2g2562 486 PRINTS Na+/H+ exchanger signature 77 85 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2562 Prci-Chr2 21910591 21916319 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2562 23 484 Antiporters AT5G55470 71.030 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2562 - - gmx:100813332 771.926