Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2553 ATGCCTGAGCAAGAAATTTGCAGTTCAACGATGGAATCACGTCTTGTGGCGAGGAAATTCTTGGCCAGGCCTCAGCGTGAAGGTGTTGGCGCCGTTGTTAGAAGAAGCATCGGACGGTTTGAGCTTAAGTACTTTGATCCTTTCCTGGTGCTGGATGAATTCTCAGTTTCTGCTCCTTCTGGCTTCCCTGATCATCCGCATAGAGGATTTGAGACGGTCACATACATGTTGCAGGGAGCTATAACACATGAGGATTTTGAAGGGCACAAAGGAACTATTGAAGCAGGTGACTTGCAGTGGATGACTGCAGGGAGAGGGATAGTTCACTCTGAGATGCCTGCAGCTCAAGGAATTCAAAAAGGTCTTCAGCTTTGGATCAATCTTGCTTCCAATGAGAAAATGATTGAGCCAAGGTATCAAGAGATGTTAAGCAAGGACATAGCAGAAGCAGTGAAAGATGGGATTAAAGTACGGGTCATAGCAGGAGAAGCCTTAGGAACAAAGTCTCCAATCCAAACAAGAACTCCAACCATGTACTTGGATTTCTCTCTCAAACCTGGGGCCCACTTGCAGCAACCAATTCCAAAGTCATGGAATGCTTTTGCCTATGTTTTGGAAGGAGAAGGTGTGTTTGGCAACATGAAATCTCAGCCTGTCTCTTCGCACCATATTCTTCTTCTTGGTGCAGGAGATGGGCTAGAGGTATGGAACAAGTCTAGTAAGGTGCTTAGGTTTGTGCTTGTTGGAGGCCAACCATTGGGTGAGCCTGTGGCTCAGTTTGGACCCTTTGTGATGAACACTCAAGAAGAGATTGACCAAACCATTGATGATTTTGAGAACTGTGTCAATGGGTTTGAGAAAGCTAGGCATTGGAAGTCTGAGGCTGCAATAACTCTGGATTTTTAG 906 0.457 MPEQEICSSTMESRLVARKFLARPQREGVGAVVRRSIGRFELKYFDPFLVLDEFSVSAPSGFPDHPHRGFETVTYMLQGAITHEDFEGHKGTIEAGDLQWMTAGRGIVHSEMPAAQGIQKGLQLWINLASNEKMIEPRYQEMLSKDIAEAVKDGIKVRVIAGEALGTKSPIQTRTPTMYLDFSLKPGAHLQQPIPKSWNAFAYVLEGEGVFGNMKSQPVSSHHILLLGAGDGLEVWNKSSKVLRFVLVGGQPLGEPVAQFGPFVMNTQEEIDQTIDDFENCVNGFEKARHWKSEAAITLDF 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2553 301 CDD cupin_pirin_C 176 252 - -
Prci2g2553 301 CDD cupin_pirin_N 31 128 - -
Prci2g2553 301 SUPERFAMILY RmlC-like cupins 14 293 IPR011051 -
Prci2g2553 301 Gene3D Jelly Rolls 27 279 IPR014710 -
Prci2g2553 301 FunFam pirin 27 166 - -
Prci2g2553 301 PIRSF Pirin 12 292 IPR012093 -
Prci2g2553 301 Gene3D Jelly Rolls 148 253 IPR014710 -
Prci2g2553 301 Pfam Pirin 33 126 IPR003829 -
Prci2g2553 301 Pfam Pirin C-terminal cupin domain 179 283 IPR008778 -
Prci2g2553 301 PANTHER PIRIN-RELATED 6 295 IPR012093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2553 Prci-Chr2 21583199 21587437 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2553 14 289 Calmodulin-binding Proteins AT3G59220 59.353 1.84e-126 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2553 K06911 - gmx:100811930 549.28