Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2544 ATGGCACAGCCCAGCGAATCCCATTCTCCATTAAAGCCTCTCCAAAACGAAGAAGACAATCATCTATTGAGGCAACCACCGCCAGAAATAGACGAACAAGACGAAGAGAGCTTCTCCTGCGCGATGCTCGCGACTTCTACTGCGATTTCCATGGCCATGCAAACGTCGGTGGAGCTCGGCGTCTTCGACGTCATTCACAGAGCTGGTCCCTGCACCGAGATCTCCGCCGCCGAGATCGCGTCGGAGGTTTCTTGCAAGAACCCAGAAGCAGCTTCCGCGCTCGATCGACTCCTCCATCTTCTAGCGTCTCACTCTGTTCTTCGTTGTTCCGTTATCGTTGACGAGAATGGAGGGTCGGGATGTTACAGGCGGTTGTACAGCCTCTCCCCGGTGGCCAAATTCTTTGTTCGAAATGCGGATGGTGCATCGTTAGGCCCCTTCATTGAATTGGCTCAGGATAAGGTCTTCCTGGATAGCTGGTCCCAACTGAAAGATGCAATATTGGAAGGGGGTATTTCATTCAATAGGGTGCATGGGTCACAAATGTTTGAGTATGTGAGAATGGACTCCAGATTGAACCACGCGTTTGACAAAGGGATGATGAATCATAGTACTATAGTTATGAATAAGGTTCTTGAATCCTACCAAGGTTTTGGGGACATCACTAGACTCATCGATGTTGGTGGAGGTGTTGGGATTACTCTCAAGTTGATTACATCCAAATATCCACATATTGAAGGAATCAATTTCGACTTGCCTCATGTCATTCAACATGCTCCTCCTTTTCCTGGAGTGGAACACGTGGAAGGAGATATGTTTGAAAGCGTGCCCGGAAGAGATGCCATCTTCATGAAGTGGATACTTCATGATTGGAGCGATGAACGGTGCTTGAAGCTGTTGAAGAATTGCCATGACGCCATTCCTAAAGATAGAAAGGTGATTGTGGTGGAGGCAGTTTTACCAGTTGGATCAGAAACTTCTGCTGCAGCGAAAGGCATCACCCAATTTGATGTCATGATGTTGACTTATTGCCCAGGTGGCAAGGAGAGAACCAAGCATGAGTTCATGAAATTAGCCACATTAGCTGGGTTTAGAGGCATTAGATTTGATTGCTCTGTTCGAAACCTTTGGATTATGGAGTTCTTCAAGTAG 1152 0.4731 MAQPSESHSPLKPLQNEEDNHLLRQPPPEIDEQDEESFSCAMLATSTAISMAMQTSVELGVFDVIHRAGPCTEISAAEIASEVSCKNPEAASALDRLLHLLASHSVLRCSVIVDENGGSGCYRRLYSLSPVAKFFVRNADGASLGPFIELAQDKVFLDSWSQLKDAILEGGISFNRVHGSQMFEYVRMDSRLNHAFDKGMMNHSTIVMNKVLESYQGFGDITRLIDVGGGVGITLKLITSKYPHIEGINFDLPHVIQHAPPFPGVEHVEGDMFESVPGRDAIFMKWILHDWSDERCLKLLKNCHDAIPKDRKVIVVEAVLPVGSETSAAAKGITQFDVMMLTYCPGGKERTKHEFMKLATLAGFRGIRFDCSVRNLWIMEFFK 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2544 383 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 141 381 IPR029063 -
Prci2g2544 383 Gene3D Vaccinia Virus protein VP39 136 383 IPR029063 -
Prci2g2544 383 CDD AdoMet_MTases 223 316 - -
Prci2g2544 383 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 41 383 IPR016461 GO:0008168
Prci2g2544 383 FunFam Caffeic acid O-methyltransferase 136 383 - -
Prci2g2544 383 PIRSF O-mtase 24 383 IPR016461 GO:0008168
Prci2g2544 383 Pfam O-methyltransferase domain 160 365 IPR001077 GO:0008171
Prci2g2544 383 Pfam Dimerisation domain 51 102 IPR012967 GO:0046983
Prci2g2544 383 PANTHER O-METHYLTRANSFERASE 41 369 IPR016461 GO:0008168
Prci2g2544 383 MobiDBLite consensus disorder prediction 12 31 - -
Prci2g2544 383 Gene3D - 19 135 IPR036388 -
Prci2g2544 383 FunFam Caffeic acid 3-O-methyltransferase 20 135 - -
Prci2g2544 383 SUPERFAMILY "Winged helix" DNA-binding domain 40 138 IPR036390 -
Prci2g2544 383 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2544 Prci-Chr2 21385480 21389387 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2544 34 383 Monolignol Biosynthesis Gene Families AT5G54160 49.429 5.08e-125 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2544 K13066 - qsa:O6P43_027445 472.626