Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2530 ATGGAGAAAATGCTGGTTTGCATTCTTCTTCTTCCTCTCTTTATCATAGTTTGTGCAGATGAGTTCTCAGAATCTGAATCTTTCTTCAGTTTCATGAGAGCCATTGATCCCCAAAATGTACTTAACATGAGCAACCTGGGATTTTCATTACATCCATGCTTGCTTGAGATCAGTGGTATCATAAGATGCAACTCAGATGCTTCCAATATTGTAGACATAAGCCTTCAGAACATGAATCTTAGTGGCATAATCAATGCAGATTCCTTATGTAGGCTTCAAAATCTGGAAAGTGTTAACTTAGCTGAGAATCGCATCAGAGGAAACATTCCTGACTCAGTTGTGCACTGCACAAGGCTGGTGTATTTGAATCTAAGCAGCAATCAGCTGAGTGGGAGGGTACCTAAAACCTTAACAAAACTGAGATATCTCAGAACATTTGACATCTCTAACAACGATTTTTCTGAGGATTCTAGATTATCAGAGAGGAATAGTAAAAGTGAGGGATTTAAGTTAAGGAAACTGATGCAAGATCCATCAGAATCAAGTCCTCCTGACAACAATGAATCTGGCAGGTCCAAAAGCAAATGGTATACAGATTGGAAAAAGTTGGCACCAATACTGGGAGGTGTTGGATTGTTATCATTAGCTCTTTTCTTTATAGGAAAGAAAGCTCCCAAGTTAAATGAAGGGAAGGAGAAGATGGAAACCCTTGGAGATTCTCTGGCCGAGACACAGAAACAAGAACTTTCAGAAGATGTGAAGATGAAGAAGAGATCAGATTCAGAGCTTGTGTTCTTTGTTGAAGAGCATGAAAGGTTCACATTGGAGGACTTGCTTCAAGCCACAGCTGACTTGAGAAATGAAAGCTTTTGCAGCAGCCTTTACAAGGTAATACTGAAGAATAATATGCATTATGCCGTGAAAAGGCTAAAGAATTTGCAGGTATCTTCTGGTGAATTTGGAGAAACATTGAGGCAGTTAAGTTACCTGAAACATCCAAACATTCTTCCCCTTGTTGGCTATCGCTCTACAAGTGAAGAAAAACTTCTAATTTATAAATATCAAAGCAATGGAAGTCTGCTATTCCTTCTAAAAGAATATATGCAAGGTAAAAAAGAATTCCCATGGAAACTGAGACTGTCCATAGCAGCTGGGATTGCAAGAGGTTTGGGGTTCATTTATCAGAATATGGAAGGTAGAAAGATCATTCCTCATGGAAACCTCAAGCTTTCAAATATCCTTCTTAATGACAAAAATGAACCTCTGATCAGTGAGCATGGACTATCAAAGTTCTTAGACCCTAACACATCATTCTTCTTTGCCTCTCATGGATACACTGCTCCAGAAAACAGTTTGACAGAGAAAAGTGATGTTTTTAGTTTCGGAGTGATTCTCTTGGAACTGCTAACAGGAAAAAGTATAGAAATAAACAGCATAGACCTACCTAGATGGGTGACATCCATGGTGAGAGAGGAATGGACAGGAGAGGTGTTTGATAAAGGAGTTAGAGAAACTGAATATCAGTGGGCATTTCCTGTGCTGAACATCGCCCTTTTGTGCGTGTCGCGTGTCCCCAAAAATCGACCAACCATGGAAGAAGTTTTGGAGAGAATAGACAAGGTCATGCAGGAGTATGAACATGTTCAGATGTTGCAGGATGAACATGGTTCAACATGTTGCAATAATGGAAGCCATGAAGTTATTTGTTCACTGCACAAGATCATACCAGAAACATGGGACTCTCCTGGATCAAATTACTGA 1761 0.3958 MEKMLVCILLLPLFIIVCADEFSESESFFSFMRAIDPQNVLNMSNLGFSLHPCLLEISGIIRCNSDASNIVDISLQNMNLSGIINADSLCRLQNLESVNLAENRIRGNIPDSVVHCTRLVYLNLSSNQLSGRVPKTLTKLRYLRTFDISNNDFSEDSRLSERNSKSEGFKLRKLMQDPSESSPPDNNESGRSKSKWYTDWKKLAPILGGVGLLSLALFFIGKKAPKLNEGKEKMETLGDSLAETQKQELSEDVKMKKRSDSELVFFVEEHERFTLEDLLQATADLRNESFCSSLYKVILKNNMHYAVKRLKNLQVSSGEFGETLRQLSYLKHPNILPLVGYRSTSEEKLLIYKYQSNGSLLFLLKEYMQGKKEFPWKLRLSIAAGIARGLGFIYQNMEGRKIIPHGNLKLSNILLNDKNEPLISEHGLSKFLDPNTSFFFASHGYTAPENSLTEKSDVFSFGVILLELLTGKSIEINSIDLPRWVTSMVREEWTGEVFDKGVRETEYQWAFPVLNIALLCVSRVPKNRPTMEEVLERIDKVMQEYEHVQMLQDEHGSTCCNNGSHEVICSLHKIIPETWDSPGSNY 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2530 586 Gene3D Ribonuclease Inhibitor 27 175 IPR032675 -
Prci2g2530 586 PANTHER OS05G0588300 PROTEIN 5 154 - -
Prci2g2530 586 Gene3D Phosphorylase Kinase; domain 1 245 354 - -
Prci2g2530 586 Pfam Protein kinase domain 293 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2530 586 SUPERFAMILY L domain-like 30 156 - -
Prci2g2530 586 Pfam Leucine rich repeat 94 153 IPR001611 GO:0005515
Prci2g2530 586 SUPERFAMILY Protein kinase-like (PK-like) 292 537 IPR011009 -
Prci2g2530 586 Coils Coil 227 247 - -
Prci2g2530 586 MobiDBLite consensus disorder prediction 155 193 - -
Prci2g2530 586 MobiDBLite consensus disorder prediction 155 174 - -
Prci2g2530 586 ProSiteProfiles Protein kinase domain profile. 279 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2530 586 Coils Coil 531 551 - -
Prci2g2530 586 Gene3D Transferase(Phosphotransferase) domain 1 356 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2530 Prci-Chr2 21167010 21169396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2530 79 541 Receptor kinase-like Gene Family AT3G08680 31.727 7.60e-62 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci2g2530 Pkinase 1.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2530 - - aprc:113874587 676.011