Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2524 ATGCAGACATCTCAGAAACATGAGATTTTCTATGGCTCTGTGCAAACTCTGGAATCATATAACTCCTCCATTATTCAAACTCTGGAATCATCTTGCTCAACAAGTAACAGTAATCCTGGTCTAAGTTCTCCATCAGCTAATGGAAGCGCAGAATCAGAATCAGGCATGTTAAAGCCACAGTATTCACTTGAATCTTGCTTGACACTTACACCAGACCTCAATGACCTCAGCCAAAAGCTAAGAGAGTTGGAGACAGCAATGCTGGGACCTGATGCAGATATTTCAGCCACATATGATTCTGATGATACAGCCATGTATGAAGCAGAGAAGTGGAAGAAGACAATTGAGATGATATCTAGAGGGGACATGAAAGAGATGCTTTGTGCTTGTGCATATGCCATGGTGGAGAATGATATGGAGACAAGCGAATGGCTGATGTCCGAGCTGCGTGAAATGGTATCTGTTTCTGGAAATCCTCTGCAACGTTTAGGAGCATACTTGTTAGAGGCTCTTGTGGCTAGATTGTCTTCTTCAGGAAGCAAAATCTGCAAATCCTTGAAATGCAATGAACCTACTTCTTCTGAACTCCTTTCTTATATGAATACATTATATGAAATCTGCCCATACTTCAAGTTTGGCTATTTATCAGCAACTGGGGCAATTGCTGATGCCATGAAGAGGGAGAATAGGGTTCATATAATTGATTTTCAGATAAATCAAGGTATCCAATGGGTGAGTCTTATCCAAGCTCTCGCCTTCCGACCAGGAGGGCCCCCAGAGATCAGAATAACTGGAGTTGATGACTCCATTTCAGCTTTTACTAGAGGAGGAGGGCTTGAGATTGTGGGGAAAAGATTATCAGCACTTGCACAGTCATGTAATGTTCCATTTCAGTTCCATGCTGTGGAAGTTTCTTCATCTGATGTTCATCTACAACACCTTGAGCTTCTACCTGGCGAAGGCATTGCCGTGAACTTCACCATGATGCTGCACCATCTTCAAGATCAGACAATAGAGCGCTTGTTGAGATTAGTTAGTTGCTTGCGTCCCAAGGTAGTGACCCTTGTTGAGCAAGAAAGTGAAACCAATCATGTCCCCTTCTTCCCACGTTTTGTTCAGACAATGAACTACTACTTGCCTGTTTTCGAGTCAATTGATGATGTTATGCCAAGGGACAACAGGTACAGGATCAATGTGGAACAACATTGTTTGGCTCGAGAGATTGTGAACTTGATAGCATGTGAAGGGGAAGACAGAGTGGAACGACACGAGACTTTGGAAACTTGGAAATCGCGCTTCAGAATGGCAGGGTTTAGTCCATATCCATTGAGCTCATTCATTAACTTTACTATCAAGAATCTTCTGGAAGGCTATTCCAGAAACTACACTCTACAAGAGAAAGATGGCGCTCTATACCTTGGTTGGATGAATCAACCTCTTGTAGCCTCTTGTGCTTGGAGATGA 1464 0.4283 MQTSQKHEIFYGSVQTLESYNSSIIQTLESSCSTSNSNPGLSSPSANGSAESESGMLKPQYSLESCLTLTPDLNDLSQKLRELETAMLGPDADISATYDSDDTAMYEAEKWKKTIEMISRGDMKEMLCACAYAMVENDMETSEWLMSELREMVSVSGNPLQRLGAYLLEALVARLSSSGSKICKSLKCNEPTSSELLSYMNTLYEICPYFKFGYLSATGAIADAMKRENRVHIIDFQINQGIQWVSLIQALAFRPGGPPEIRITGVDDSISAFTRGGGLEIVGKRLSALAQSCNVPFQFHAVEVSSSDVHLQHLELLPGEGIAVNFTMMLHHLQDQTIERLLRLVSCLRPKVVTLVEQESETNHVPFFPRFVQTMNYYLPVFESIDDVMPRDNRYRINVEQHCLAREIVNLIACEGEDRVERHETLETWKSRFRMAGFSPYPLSSFINFTIKNLLEGYSRNYTLQEKDGALYLGWMNQPLVASCAWR 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2524 487 MobiDBLite consensus disorder prediction 31 55 - -
Prci2g2524 487 Pfam GRAS domain family 124 487 IPR005202 -
Prci2g2524 487 ProSiteProfiles GRAS family profile. 114 487 IPR005202 -
Prci2g2524 487 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 86 481 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2524 Prci-Chr2 21041008 21044914 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2524 65 487 GRAS Transcription Factor Family AT5G48150 61.839 0.0 549
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci2g2524 GRAS 4.2e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2524 - - pcin:129303763 977.237