Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2505 ATGATCCACCATAATCTTCATCAGATGAAGCTTCTTGATTCCTCAAGGTTGGAAATGCCCCCAGGAGTCAGCGTTTTCCTCCAACCCATTTTCACTCACGGGTTCTCTTGTTCACTGCACCTGGTCTTGCTGCTCGTGTTACTGGTAACATGGGCATGTCAGAAAGCCAAGGGAGGCCGTAGGGAAAGTGAAGAAAAAGGAGTTTATAATGCTGGGGTTTTGTACTCCAAACTGGCTCTTATCTGTTGTTTAGTTGTTTGTGCTTTTAACATTGTGTTGTGCTTACTGAACTACTTTTTCTGGTTCAAGAACGGTAGCTCGGAAGAAATTGTTATTATCTTGGATTTTGTGATGAAAACTGCTGCCTGGGGTGCTCTCTGTGTTTATTTGCGTTATAGATTCTCCAGTTCAGGGGAGCAAGACTTTCCCAGATTCTTAAGAATTTGGAGCTGGGCCTGCTCCTTTGTTTTCTGTTCTTGCGTTGTAATAGACTTTGTGCTCTATAGAGAACATGTTTTCCTCCCAATAATATACCTTGTTTCTGACATCGGTTCCACTCTCTCGGGTCTGTTTCTCTGTTATGTGGAATTTTCAGCAAACAGAGAGGCAAAACTTGCCCTTCTTGAAGAACCCCTTTTGACTGGTGATTCTAGGGAAAGTAACAGTTATGAGTCCTATAAGAACACCTCCTATTCAAAAGCTGGATTTTTAAGTATTGTTACTTTTTCATGGATGAGTCCTCTAATTGCTGTTGGAAATAAGAAGACTTTAGGCCTTGAGGACCTCCCTTTGCTCTCTAGCCATGATAGTGTATATGGGACGTTCCCAACTTTTAGAAACAACCTTGAATCAGAGTGTAGCGATGATCTTAGAAGAGTGACCACACTCAAGCTGGCGAAGGCTTTATTCTTCTCAACATGGAAAGGAATTCTTTTATCAGCTTTATTTGCATTCTTATTCACAAGTGCCTCTTATGTTGGTCCCTTTCTGATTGACATCTTTGTTGAATACCTTGATGGGCAAGAAAGGTTTAAAAATGAGGGTTATGTTTTGGCAATGGCATTTTTAGGCGGAAAGCTTGTGGAGTGCCTTTCACAGAGGCACTGGATGTTTAGGTTCCAGCAAGTTGGGGTTAGGTTTCAATCAATGTTGGTGGCAATGATCTACACTAAAGGATTGACCCTTTCATGTCAGTCAAAGGAAGGTCGAACTAGTGGGGAGATTATCAACTTAATGACTGTTGATGCTGCTAGGGTGGGTGAGTTTTGCTGGTACATGCATGATCCATGGATGGCTGTTCTGCAAGTAACTTTAGCTTTGGTTATTCTATATAGAAGTGTTGGGATTGCTTCAATAGCTGCTTTTGCTTCTACTGTTTTGATGATGTTGGCAAACTTGCCATTGGGGTCACTGCAAGAGAAGTTTCAGAGGAAGTTAATGGAGTCAAAAGACACAAGAATGAAGGTCACCTCTGAGATTTTAAAGAACATGAGGATTCTAAAGCTGCAAGCATGGGAGATGAAGTTTCTGTCAAGAGTTATTGAGATTAGGAACACTGAGACAGGATGGCTAAAGAAATTTTTATTCAGCACAGGAATGACAAGATTCCTCTTCTCTTCTGCCCCAACTTTCATTGCTATGGTTACTTTTGGTACTTGTATTCTCATAGGAATCCCACTTGACTCAGGGAAGATCTTAGCTGCACTGGCCACATTCAGAATTCTGCAGCAGCCCATATACAACCTTCCTGACACAATCTCAATGATAGCACAAACTAAGGTTTCCCTCGATAGGATTGCATCGTTCCTTTGTCTTGAAGATCTGCATTCTGATGTTGTAGAGAGGCTTCCTAGGGGTAGTACTGATACAGCAATTGAGATAGTGGGTGGGAATTTCTCTTGGGATTTATCTTCACCTGTTCCTACCTTGCAAAATATAAACATGAACATAGTCCATGGCTTCAAGGTTGCAGTTTGTGGTACTGTTGGTTCTGGAAAGTCAAGTTTACTCTCTTGTATACTAGGAGAAGTATCAAAGCTCTCTGGGACATTGAAGGTGTGTGGGACAAAGGCTTATGTTGCTCAGTCCCCATGGATACAAGGTGGCAAGATAGAAGAGAACATACTATTTGGGAAAGAGATGGATAGAGAAAAATATGAGAAGGTTTTAGAAGCTTGTTCCTTGAAAAGAGACCTGGAAATTCTTCCCTTCGGTGATCAAACTGTTATTGGAGAGAGAGGTATCAATCTGAGTGGTGGGCAGAAGCAAAGAGTACAAATAGCTCGCGCTCTATACCAAGACGCTGATGTATATCTGCTTGATGATCCTTTTAGTGCTGTAGATGCCCATACAGGATCCCACATCTTTAAGGAATGTTTGCTTGGCCTTTTGAGTTCAAAAACAGTGTTATATGTGACTCATCAAGTAGAGTTCTTACCTGATGCTGATCTAATATTGGTCATGAGAGATGGAAAGATAACTCAATCAGGGAAGTACAATGACATACTCAACTCAGGCACTGATTTTATGGAGCTTGTAGGTGCACATAGAGAAGCCTTGTCTGCAATTAAGTCATTAGAGAGAAAACCCACCTCTAAAGAAATTAATTCCACTGTGAATGAGACAGACACCTTAAGTAAATTTGGACTTGAGGAAAATGTTGAAAACAAAGATGTTCAAAAGGAAGATGATAAAGGTGGGTCAAAAGGCCAGCTTGTTCAAGAAGAAGAAAGAGAAAAGGGCAGAGTTGGGTTTGAAGTTTATTGGAAATTCATCACAACAGCATATGGAGGGGCTCTTGTACCCTTCATATTACTATTGCAAGTGCTTTTTCAGGTTTTTCAAATTGGAAGCAATTATTGGATGGCATGGGCAGCTCCTGTATCAGCAACTATGGAGCCTCCTGTTGGGAGCTTTACACTTTTGCTTGTCTATGTTGCTTTAGCCATTGGAAGTTCTTTTTGCAACCTTGCTAGAACAATGCTTCTTCTCATAGCTGGATATAAGACAGCCACTATACTCTTCAATAAATTGCATATGTGCTTCTTCCGAGCCCCTATGTCATTTTTTGATTCTACACCAAGTGGACGAATCCTAAACAGAGCTTCCACGGACCAAAGTACTGTAGATATGAGCATTCCACTTTTAGTTGGAGCAGTTGCCTTTTCTCTTATTCAACTTTTGGGAAATATTGCTGTGATATCTCAAATTGCGTGGCAAGTTTTTTTAGTATTTATTCCTGTGGTTGCAGCTTGCATATGGTACCAGCGATATTACTCAGAATCAGCACGAGAATTGTCCCGTTTAGTTGGTATATGTGAAGCTCCAATCATACAACATTTTTCTGAAACCATTTCTGGATTAATGACCATCAGATGTTTTGACCAAGAAGCAAGATTTCAGGAGACAAACATGAAACTGATAGACAGATATTCCAAGCCCAAGTTATACAATACCACTGCAATGGAATGGCTGTGCTTCCGATTGGATATGTTATCTTCTATAACATTTGCCTTCAGTTTGGTTTTCTTGATATCTTTTCCAAATGCAATTGGTGTTCCTGGCATTGCTGGCTTGGCTGTGACATATGGGTTTAATCTAAACATGGTGCAAGCTGGATTGATTTGGATGCTTTGCAATATGGAGAACAAAATTATATCAGTGGAAAGAATATTTCAGTATACTAACATCCCAAGTGAGCCCCCTCTTGTGATAGAAGAAAACAGACCAGATCGTTCATGGCCGTCATCTGGGGAGGTTCATATCCAGGATTTGCAGGTTCGATATGCGCCTCACTTGCCTCTTGTGTTGCGAGGTCTTACTTGCACTTTCAATGCTGGAGGAAAAACGGGCATTGTAGGGAGAACTGGAAGTGGAAAATCAACTCTAGTACAGACACTATTCAGACTTATTGAACCTACATATGGTCGGATACTAATAGATGGCATTGGTATCGCTTCAATTGGGCTTCATGATTTACGATCTAGACTAAGCATTATTCCTCAAGATCCAACTATGTTTCAAGGCACTGTAAGAAGTAATCTAGACCCACTTGAAGAGTACACTGATGAACAGATTTGGGAGGCTTTAGATATGTGCCAACTTGGAGATGAAGTCCGGAAGAAGGAAGGAAAGCTTGATTCCATTGTTACTGAGAATGGAGAAAATTGGAGCATGGGTCAGAGACAACTCGTCTGCCTCGGCCGTATTCTACTTAAAAGGAGCAAGATTTTGGTGCTTGATGAAGCAACTGCATCAGTCGATACTGCTACAGATAACATTATTCAGCAAACCTTGAAGCACCATTTCTCAGAATGTACAGTTATAACCATTGCACACAGAATAACTTCTATTCTTGATAGTGGCATGGTTTTGGTTTTGAACCAAGGGCTTATTGAGGAATATGATTCACCAAAAAGATTGCTGAAGAACAAATATTCATCTCTTGCTCAGCTAGTTGCAGAGTACACTCGCAGGTCGGACTCAGGCTTTGAAACTTAG 4500 0.4089 MIHHNLHQMKLLDSSRLEMPPGVSVFLQPIFTHGFSCSLHLVLLLVLLVTWACQKAKGGRRESEEKGVYNAGVLYSKLALICCLVVCAFNIVLCLLNYFFWFKNGSSEEIVIILDFVMKTAAWGALCVYLRYRFSSSGEQDFPRFLRIWSWACSFVFCSCVVIDFVLYREHVFLPIIYLVSDIGSTLSGLFLCYVEFSANREAKLALLEEPLLTGDSRESNSYESYKNTSYSKAGFLSIVTFSWMSPLIAVGNKKTLGLEDLPLLSSHDSVYGTFPTFRNNLESECSDDLRRVTTLKLAKALFFSTWKGILLSALFAFLFTSASYVGPFLIDIFVEYLDGQERFKNEGYVLAMAFLGGKLVECLSQRHWMFRFQQVGVRFQSMLVAMIYTKGLTLSCQSKEGRTSGEIINLMTVDAARVGEFCWYMHDPWMAVLQVTLALVILYRSVGIASIAAFASTVLMMLANLPLGSLQEKFQRKLMESKDTRMKVTSEILKNMRILKLQAWEMKFLSRVIEIRNTETGWLKKFLFSTGMTRFLFSSAPTFIAMVTFGTCILIGIPLDSGKILAALATFRILQQPIYNLPDTISMIAQTKVSLDRIASFLCLEDLHSDVVERLPRGSTDTAIEIVGGNFSWDLSSPVPTLQNINMNIVHGFKVAVCGTVGSGKSSLLSCILGEVSKLSGTLKVCGTKAYVAQSPWIQGGKIEENILFGKEMDREKYEKVLEACSLKRDLEILPFGDQTVIGERGINLSGGQKQRVQIARALYQDADVYLLDDPFSAVDAHTGSHIFKECLLGLLSSKTVLYVTHQVEFLPDADLILVMRDGKITQSGKYNDILNSGTDFMELVGAHREALSAIKSLERKPTSKEINSTVNETDTLSKFGLEENVENKDVQKEDDKGGSKGQLVQEEEREKGRVGFEVYWKFITTAYGGALVPFILLLQVLFQVFQIGSNYWMAWAAPVSATMEPPVGSFTLLLVYVALAIGSSFCNLARTMLLLIAGYKTATILFNKLHMCFFRAPMSFFDSTPSGRILNRASTDQSTVDMSIPLLVGAVAFSLIQLLGNIAVISQIAWQVFLVFIPVVAACIWYQRYYSESARELSRLVGICEAPIIQHFSETISGLMTIRCFDQEARFQETNMKLIDRYSKPKLYNTTAMEWLCFRLDMLSSITFAFSLVFLISFPNAIGVPGIAGLAVTYGFNLNMVQAGLIWMLCNMENKIISVERIFQYTNIPSEPPLVIEENRPDRSWPSSGEVHIQDLQVRYAPHLPLVLRGLTCTFNAGGKTGIVGRTGSGKSTLVQTLFRLIEPTYGRILIDGIGIASIGLHDLRSRLSIIPQDPTMFQGTVRSNLDPLEEYTDEQIWEALDMCQLGDEVRKKEGKLDSIVTENGENWSMGQRQLVCLGRILLKRSKILVLDEATASVDTATDNIIQQTLKHHFSECTVITIAHRITSILDSGMVLVLNQGLIEEYDSPKRLLKNKYSSLAQLVAEYTRRSDSGFET 1499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2505 1499 Gene3D - 610 873 IPR027417 -
Prci2g2505 1499 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 311 591 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci2g2505 1499 FunFam ABC transporter C family member 5 610 857 - -
Prci2g2505 1499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1245 1478 IPR027417 -
Prci2g2505 1499 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1253 1487 IPR003439 GO:0005524
Prci2g2505 1499 SMART AAA_5 1279 1464 IPR003593 GO:0016887
Prci2g2505 1499 SMART AAA_5 652 825 IPR003593 GO:0016887
Prci2g2505 1499 SUPERFAMILY ABC transporter transmembrane region 934 1235 IPR036640 GO:0005524|GO:0016020
Prci2g2505 1499 Gene3D - 1236 1489 IPR027417 -
Prci2g2505 1499 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 231 1487 - -
Prci2g2505 1499 SUPERFAMILY ABC transporter transmembrane region 302 604 IPR036640 GO:0005524|GO:0016020
Prci2g2505 1499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 622 847 IPR027417 -
Prci2g2505 1499 FunFam ABC transporter C family member 5 897 1234 - -
Prci2g2505 1499 Pfam ABC transporter 643 777 IPR003439 GO:0005524
Prci2g2505 1499 FunFam ABC transporter C family member 10 294 607 - -
Prci2g2505 1499 Pfam ABC transporter 1270 1418 IPR003439 GO:0005524
Prci2g2505 1499 MobiDBLite consensus disorder prediction 889 908 - -
Prci2g2505 1499 CDD ABC_6TM_ABCC_D2 934 1228 IPR044726 GO:0140359
Prci2g2505 1499 Gene3D ABC transporter type 1, transmembrane domain 283 607 IPR036640 GO:0005524|GO:0016020
Prci2g2505 1499 Gene3D ABC transporter type 1, transmembrane domain 897 1234 IPR036640 GO:0005524|GO:0016020
Prci2g2505 1499 CDD ABC_6TM_ABCC_D1 312 599 IPR044746 GO:0140359
Prci2g2505 1499 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 625 848 IPR003439 GO:0005524
Prci2g2505 1499 Pfam ABC transporter transmembrane region 311 578 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci2g2505 1499 Pfam ABC transporter transmembrane region 942 1178 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci2g2505 1499 CDD ABCC_MRP_domain2 1251 1471 - -
Prci2g2505 1499 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 936 1216 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci2g2505 1499 FunFam ABC transporter C family member 3 1236 1488 - -
Prci2g2505 1499 ProSitePatterns ABC transporters family signature. 750 764 IPR017871 GO:0005524|GO:0016887
Prci2g2505 1499 CDD ABCC_MRP_domain1 625 825 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2505 Prci-Chr2 20887568 20894647 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2505 625 865 Calmodulin-binding Proteins AT2G36910 28.736 2.28e-26 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2505 - K05666 gmx:106794105 2142.08