Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2502 ATGGTGAAAAATGAGAGCGAAGACATCCTTCTTCGAGAACCTCTTTTGAATGATGATACTGATGTTAGAAATTCACCAGAGTCAAATAAGACCAAGGGGGAGGAAACTGTTACTCCTTACTCTAATGCTGGAGTTTTCAGCATTCTTAGCTTCTCTTGGGTGGGTCCTCTGATTGCTGCTGGCAGAAAGAAGACTTTAAACCTCGAGGATGTCCCACAACTAGCTACTTGTGATAGTGTAGTTGGAGCTTTTCCAGCTTTTAGGAATAAACTTGAGGATGAGTTGGGTACATTAAAGAGAGTAACCACAATTAAGCTGGTAAAGTCATTAATACTCTCATCTTGGGAAGGTATATTAGCAACAGCTATTGTTGCACTTTTGAACACACTGACTTCTTACGTTGGTCCATATCTCATTGACACTTTTGTTCAATACCTCAATGGCAAACAAACATTTAAGGATGAGGGATATGTACTGGTGGCCGTGTTTTTGGCAGCAAAGCTTATAGAGTGTTTGTCACATAGGCAATGGTTCTTTAGGTTGAAGAGAGTTGGAATAAAGATCCGAGCACTGCTCGTGACGATAGTCTACAGTAAAGAGTTGACCCTTTCAGGTCAGTCCAAGCAAGGCCACACAACTGGTGAAATAATCAATTTCATGACAGTTGATGCTGAAAGAGTTGGAGACTTTGCTTGGAACATGCATGATCCATGGATAGTAATTCTGCAAGTAGCATTGGCCATGTTTATTTTGTATAGAAATCTCGGGATGGCTTCGATTGCAGCTTTTATTGCAACTGTTGTTGTAATGTTCACAAATGTTCCTTTTGCGTCATTGCAAGAAACATACGAAGACAAGTTGATGGAGTCAAAGGATAAAAGAATGAAGGCCACATCTGAGATTTTAAGGAATATGAGGATTCTAAAACTACAAGGATGGGAAATGAAGTTTCTGTCTAAGGTTATTGAACTGAGGAACACAGAGCAAAGCTGGTTAAGGAAAGATGTCTATACTTCAGCCATGATCACTTTTGTCCTATGGGGTGCCCCCGCATTCGTATCTGTGGTTACATTTTGCACTTGTATACTCATGGGGATCCCACTTGAATCAGGAAAGATCTTATCTGCGATTGCAACATTTCGAATGCTTCAAGAGCCAGTATATAGGCTTCCAGAGACAATTTCCATGATAGCACAAACTAAGGTATCTTTAGAGAGGATTGCATCATTCCTTCGTCTTGAAGAGCTGCAGTGTAATGTTATAGAAAAGATTCCAAAGGGTAGATCTAACATAGCTGTTGAAGTAGCCAATGGTAATTTTTCTTGGGACTTTTCATCTCCTACTACAACGTTAAAAAGTATAAATCTCACAATCCTTCAAGGCATGAGAGTTGCTGTTTGTGGTACTGTTGGTTCAGGCAAGTCTAGTCTAATATCTTGTATTTTGGGAGAAGTTCCAAAGATATCAGGAAACTTAAGAGTGTGCGGAACTAAGGCATTTGTTGCTCAGTCTCCATGGATTCAAAGTAGGAAGATCGAAGAGAATATATTATTTGGTAAGGAGATGGATAGGGAAAGATATGAGAAGGTTCTTGAAGCATGCTCCCTGAAGAAGGACCTTGAAATTTTGCCATTTGGTGATCAGACTATTATTGGAGAGAGGGGAATCAATTTGAGTGGTGGACAGAAACAGAGAATACAAATTGCACGGGCTCTTTATCAAGAGGCTGATATATATCTATTTGATGATCCCTTTAGTGCTGTGGATGCTCATACGGGATCCCACCTCTTTAAGGAATGTTTACTTGGCCTTTTAAGTTCGAAGACAATTATTTATATCACTCATCAAGTAGAGTTCTTGCCTCCAGCTGACCTTATCTTGGTCATGAAAGATGGGGAAATTACTCAATGTGGAAAGTATAATGATTTACTTGACTCTGGGACCGACTTCATGGAGCTTGTTGGAGCACATAGAAAAGCTTTGTCTGCACTTGATTCATTTGATGGAGGGGAAGCGTCTGATAAATTATGTGCAAGAAGTAGAGAAGTAAATATTTCTAATGCAAAAGTTACAAATGAAAAAAAGGAAGATAAAGATAGGCAAATTGGAAAAACAAATGGTGTAGTTGAACCAAAAGGTCAGCTCATTCAAGAGGAAGAAAGGGAGAAAGGTAGAGTTGGGCTTTCAGTCTATTGGAAATACATCACAACAGCATATGGAGGAGCTCTTGTACCATTTATATTGTTGGCTCAAATTCTGTTTCAACTTCTTCAAATTGGAAGCAATTATTGGATGGCCTGGGCAACTCCCATTTCATCAAATGTAATAGCACCTGCTGGAACCTTTATGCTTATGATTGTCTATGTTGCTTTGGCCATAGGAAGTTCTTTCTGCATCCTTTCCAGAACAATGCTCCTTTCTACTGCGGGTTATAAGACTGCAACTCTACTTTTCAACAAAATGCACAATTGCATTTTCCGCGCGCCTATGTCATTTTTTGATGCCACTCCAAGTGGAAGAATCATTAGTAGAGCTTCTACAGACCAAAGTGTATTGGATACAAACATTCCTTATAAATGTGGATCATTTGCATTCTCTTCAATTCAGCTTTTAGGAATTATATTAGTGATGTCTCAGGTTGCATGGCAGGTTTCCATCATCTTCATACCTGTAATATCTATGAGCATTTGGTGTCAGCAATACTATTTACCAACATCTCGAGAACTATCACGGATACTTGGACTTTGCAAAGCTCCAATTATTCAACACTTCTCTGAAACAATTTCAGGAGCAACAACTATCAGAAGCTTTGATCAGGAGTCAAGATTCCAGGAAACAAATATGAAATTGGTGGATGAGTATTCTCGTCTGAATTTCAATATTGCCGGCACTATGGAATGGCTCGTCTTCCGCTTGGATATGTTGTCTTCAATCACATTTGCTTTTTTCTTGATATTCCTGATATTTATGTCCAAGGGAGTGGTAGATCCAGGCATTGCTGGATTAGCTGTTACATATGGACTTAACCTGAACTTGTTACAAGCTTGGATGATGGTGGATCTTAGCAAAATGGAAAATAAAATTATATCAGTGGAGAGAGTATTACAGTACACTTGCATTCCAAGTGAGCCTCCCCTTGTAATAGAAGAAAATCGACCTTATCTTTCATGGCCTTCACATGGAGAAGTTGATATTATTGATCTACAGGTTCGTTATGCCCCACATTTACCACTTGTATTGCATAGCATAACATGCAAATTCCACGGAGGAATGAAAACTGGCATAGTAGGGAGAACAGGAAGTGGTAAAACAACTCTCATACAAACACTTTTTAGGATCATTGAGCCGACTGCCGGGAAAATTGTGATTGACGGAATTAATATCTCGTCAATTGGACTTCATGATTTGAGGTCCAGGCTTAGCATTATTCCTCAAGATCCAACCATGTTTGAAGGCACAGTGAGAAGTAATCTAGACCCTTTGGAAGAGTACACAGATGAACAAATTTGGGAGGCTTTGGATAAGTGCCAACTTGGAGATGAAGTTCGAAAGAAAGAAGGAAAGCTGGACTCTGCAGTTAATGAAAACGGTGAGAATTGGAGCATGGGTCAGAGGCAATTGGTGTGCCTTGGTAGGGTGCTACTTAAGAGAAGTAAGGTGTTGGTGCTTGATGAAGCTACTGCTTCGGTTGATACTGCCACTGATAATTTGATTCAGCAAACTCTTCGACAACACTTCTCTGACTGTACTGTCATTACCATTGCACATAGAATAACTTCTATTCTTGACAGTGATATGGTTTTGCTTCTTAATCAAGGACTCATTGAAGAGTATAACTCACCAGCAAAATTGCTAGAGGACAAGTCATCTTCATTTGCTCAACTTGTTGCAGAATATACCATAAGATCCAAGTCCAGTTTAGAGTGA 3927 0.395 MVKNESEDILLREPLLNDDTDVRNSPESNKTKGEETVTPYSNAGVFSILSFSWVGPLIAAGRKKTLNLEDVPQLATCDSVVGAFPAFRNKLEDELGTLKRVTTIKLVKSLILSSWEGILATAIVALLNTLTSYVGPYLIDTFVQYLNGKQTFKDEGYVLVAVFLAAKLIECLSHRQWFFRLKRVGIKIRALLVTIVYSKELTLSGQSKQGHTTGEIINFMTVDAERVGDFAWNMHDPWIVILQVALAMFILYRNLGMASIAAFIATVVVMFTNVPFASLQETYEDKLMESKDKRMKATSEILRNMRILKLQGWEMKFLSKVIELRNTEQSWLRKDVYTSAMITFVLWGAPAFVSVVTFCTCILMGIPLESGKILSAIATFRMLQEPVYRLPETISMIAQTKVSLERIASFLRLEELQCNVIEKIPKGRSNIAVEVANGNFSWDFSSPTTTLKSINLTILQGMRVAVCGTVGSGKSSLISCILGEVPKISGNLRVCGTKAFVAQSPWIQSRKIEENILFGKEMDRERYEKVLEACSLKKDLEILPFGDQTIIGERGINLSGGQKQRIQIARALYQEADIYLFDDPFSAVDAHTGSHLFKECLLGLLSSKTIIYITHQVEFLPPADLILVMKDGEITQCGKYNDLLDSGTDFMELVGAHRKALSALDSFDGGEASDKLCARSREVNISNAKVTNEKKEDKDRQIGKTNGVVEPKGQLIQEEEREKGRVGLSVYWKYITTAYGGALVPFILLAQILFQLLQIGSNYWMAWATPISSNVIAPAGTFMLMIVYVALAIGSSFCILSRTMLLSTAGYKTATLLFNKMHNCIFRAPMSFFDATPSGRIISRASTDQSVLDTNIPYKCGSFAFSSIQLLGIILVMSQVAWQVSIIFIPVISMSIWCQQYYLPTSRELSRILGLCKAPIIQHFSETISGATTIRSFDQESRFQETNMKLVDEYSRLNFNIAGTMEWLVFRLDMLSSITFAFFLIFLIFMSKGVVDPGIAGLAVTYGLNLNLLQAWMMVDLSKMENKIISVERVLQYTCIPSEPPLVIEENRPYLSWPSHGEVDIIDLQVRYAPHLPLVLHSITCKFHGGMKTGIVGRTGSGKTTLIQTLFRIIEPTAGKIVIDGINISSIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSAVNENGENWSMGQRQLVCLGRVLLKRSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSILDSDMVLLLNQGLIEEYNSPAKLLEDKSSSFAQLVAEYTIRSKSSLE 1308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2502 1308 Pfam ABC transporter transmembrane region 747 999 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci2g2502 1308 Pfam ABC transporter transmembrane region 121 384 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci2g2502 1308 CDD ABC_6TM_ABCC_D2 744 1038 IPR044726 GO:0140359
Prci2g2502 1308 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 430 655 IPR027417 -
Prci2g2502 1308 SMART AAA_5 1089 1274 IPR003593 GO:0016887
Prci2g2502 1308 SMART AAA_5 460 633 IPR003593 GO:0016887
Prci2g2502 1308 Gene3D ABC transporter type 1, transmembrane domain 708 1044 IPR036640 GO:0005524|GO:0016020
Prci2g2502 1308 CDD ABC_6TM_ABCC_D1 121 407 IPR044746 GO:0140359
Prci2g2502 1308 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 433 656 IPR003439 GO:0005524
Prci2g2502 1308 FunFam ABC transporter C family member 5 418 665 - -
Prci2g2502 1308 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1052 1293 IPR027417 -
Prci2g2502 1308 SUPERFAMILY ABC transporter transmembrane region 744 1044 IPR036640 GO:0005524|GO:0016020
Prci2g2502 1308 MobiDBLite consensus disorder prediction 15 36 - -
Prci2g2502 1308 Gene3D ABC transporter type 1, transmembrane domain 108 408 IPR036640 GO:0005524|GO:0016020
Prci2g2502 1308 Gene3D - 1047 1299 IPR027417 -
Prci2g2502 1308 ProSitePatterns ABC transporters family signature. 558 572 IPR017871 GO:0005524|GO:0016887
Prci2g2502 1308 FunFam ABC transporter C family member 3 1046 1298 - -
Prci2g2502 1308 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1063 1297 IPR003439 GO:0005524
Prci2g2502 1308 FunFam ABC transporter C family member 5 708 1044 - -
Prci2g2502 1308 CDD ABCC_MRP_domain1 433 633 - -
Prci2g2502 1308 SUPERFAMILY ABC transporter transmembrane region 109 415 IPR036640 GO:0005524|GO:0016020
Prci2g2502 1308 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 40 1297 - -
Prci2g2502 1308 Pfam ABC transporter 451 585 IPR003439 GO:0005524
Prci2g2502 1308 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 117 399 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci2g2502 1308 MobiDBLite consensus disorder prediction 15 30 - -
Prci2g2502 1308 Pfam ABC transporter 1080 1228 IPR003439 GO:0005524
Prci2g2502 1308 Gene3D - 409 666 IPR027417 -
Prci2g2502 1308 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 746 1026 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci2g2502 1308 CDD ABCC_MRP_domain2 1061 1281 - -
Prci2g2502 1308 FunFam ABC transporter C family member 10 102 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2502 Prci-Chr2 20736533 20742296 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2502 433 662 Calmodulin-binding Proteins AT2G36910 30.800 6.08e-26 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2502 - K05666 qsa:O6P43_013598 2018.82