Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2474 ATGGAGTCGGAGCTCCAAATTCCTTCACCTGCTGCAATCGTTTCCTTCTTCCTCTTCTCGTTCACGGTAGTTTGCATATTTTGGAGATTTAAGACCAGAAATCCAAACTCAAAGTTGCCCCCCGGGCCACCTAAGATACCTATCCTTGGGAATATGCACCAGATTGGAGCCATGCCTCATCAAAACCTGGCGAAATGGGCAAAGAAATATGGGCCTTTAATGCATCTAAAGCTTGGAGGACTCTCAAGCATAGTGGTATCCTCTCCTGAAATGGCCAAAGAAGTGATGAAAACCCATGATATCATCTTTGCAAATAGGCCTTATGTTCTTGCTGCAGATATTATCACTTATGGCTCCAAGAGCATGAGCTTCTCTCCATATGGGAGTTACTGGAGGCAGATGAGGAAGCTTTCCACTTTTGAGCTTCTGACGCCGAAGCGTGTGGAATCTTTTCGACCCATTCGGGAAGAAGAGGTTTCAAAACTTGTCAACGAGATAGCTCTGAGTGAAGGGGCAGTAATCAATCTTTCTAAGAAGGTCAACTCAATGGCCTATGGCATGACCGCTAGGATAGCTTTTGGAAGGGAATCTAAAGATCAGGAAGCTTATATAGAACTTATGAAGGAAGTTCTGAAGTTAGTAGGAGGGTTCTCTCTGGCTGATTTGTATCCATCCATTGGAGTTCTTCAAGTATTGACAGGTTTAAGGTCTAAGGCTGAGAAGGTTCATCAAGAAATGGACAGGATACTTGGGAGCATTGTAAGAGATCACAAGGACAGAGATACACAAACAGAAGCAATCCATGAAAAAGCAGAAGATATCGTTGATGTTCTGCTGAAGCTTCAGAAGCAGGACAACCTTGAACATCCTCTGTCTGATGAAATGATCAAAGCAACCATTTTGTATATTGTACAGGACATATTCAGTGCCGGAAGTGGAACTTCATCAAAAACCATAGAGTGGGCAATGGCAGAGCTGGTAAAAAACCCATGGGTGATGGAGAAAGCACAAGCTGAGGTGAGAGAAGTCTATGAAGGAAAAGGTTATGTAGATGAAGCAAGCGTTCATGAACTGAAGTACTTGAAGGCAATCATCAAAGAAACATTGCGTATGCATCCTCCGGTTCCATTGTTACTCCCAAGGGAATGCAGTGAGAGATGTGAGATTAATGGATATGAGATTGCACCTAAAAGCAAGGTGATGGTTAATGTATGGGCAATAGGGAGGGATCCTGAGTATTGGCTTGAAGCTGAGAAATTTTACCCAGAAAGATTCCTTGATAGCTCAGTGGATTACAAAGGAGCAGATTTTCAGCTCATTCCATTTGGTGCTGGAAGGAGGATGTGTCCTGGCATAACATTTGGTATTGCTAATGTTGAACTTTCACTTGCAAATTTGCTATTCCATTTTGATTGGAAGATGCCTAATGGGGAAAAGCCTGAAGATCTAGACATGAATGAATCCTTTGGCATGTCTTTGAAGAAAAAATATGATTTGGAACTAGTTCCTGTAAAATATAGCTCATCTGCAATGTAA 1536 0.4225 MESELQIPSPAAIVSFFLFSFTVVCIFWRFKTRNPNSKLPPGPPKIPILGNMHQIGAMPHQNLAKWAKKYGPLMHLKLGGLSSIVVSSPEMAKEVMKTHDIIFANRPYVLAADIITYGSKSMSFSPYGSYWRQMRKLSTFELLTPKRVESFRPIREEEVSKLVNEIALSEGAVINLSKKVNSMAYGMTARIAFGRESKDQEAYIELMKEVLKLVGGFSLADLYPSIGVLQVLTGLRSKAEKVHQEMDRILGSIVRDHKDRDTQTEAIHEKAEDIVDVLLKLQKQDNLEHPLSDEMIKATILYIVQDIFSAGSGTSSKTIEWAMAELVKNPWVMEKAQAEVREVYEGKGYVDEASVHELKYLKAIIKETLRMHPPVPLLLPRECSERCEINGYEIAPKSKVMVNVWAIGRDPEYWLEAEKFYPERFLDSSVDYKGADFQLIPFGAGRRMCPGITFGIANVELSLANLLFHFDWKMPNGEKPEDLDMNESFGMSLKKKYDLELVPVKYSSSAM 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2474 511 FunFam Cytochrome P450 71D8 32 503 - -
Prci2g2474 511 Gene3D Cytochrome P450 32 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g2474 511 CDD CYP71-like 69 499 - -
Prci2g2474 511 PANTHER OS08G0105600 PROTEIN 64 507 - -
Prci2g2474 511 SUPERFAMILY Cytochrome P450 40 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g2474 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Prci2g2474 511 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g2474 511 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g2474 511 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g2474 511 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g2474 511 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g2474 511 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g2474 511 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g2474 511 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g2474 511 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g2474 511 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g2474 511 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g2474 511 Pfam Cytochrome P450 40 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2474 Prci-Chr2 20229273 20231912 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2474 13 504 Cytochrome P450 AT5G25120 43.000 6.99e-144 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2474 - - gmx:100818000 736.487