Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2473 ATGGAGTCGGAGCTCCAAATTCCTTCACCTGCTGCAATCGTTTCCTTCTTCCTCTTGGTAGTTTGCATATTTTGGAGATTTAAGACCAAAAATCCAAACTCAAAGTTGCCTCCCGGGCCACCTAAGATACCTATCCTTGGGAATATGCACCAGATTGGAGCCATGCCTCATCAAAACCTGGCGAAATGGGCAAAGAAATATGGGCCTCTAATGCATCTAAAGCTTGGGGGACTCTCAAGCATAGTGGTATCCTCTCCTGAAATGGCCAAAGAAGTGATGAAAACCCATGATATCATCTTTGCAAATCGGCCTTATGTTCTTGCTATGGATATCATCACGTATGGCTCCAAGAGCATGAGCTCCTCTCCGTATGGGAGTTACTGGAGGCAGATGAGGAAGATTTCCACCTTTGAACTTCTGACGCCGAAGCGTGTGGAATCTTTTCGACCCATTCGGGAAGAAGAGGTTTCAAAACTTGTCAAGGAGATAGCTCTGAGTGAAGGGTCAGTAATCAGTCTTACGAAGAAGGTCAATTCAATGGCCTATGGCATGACCGCTAGGATAGCTTTTGGAAGGGAATGTAAAGATCAGGAAGCTTATATAGAACTTATGAAGGAAGTTCTGAAGTTAGTAGGAGGGTTCTCTCTGGTTGATTTGTATCCATCCATTGGAGTTCTTCAAGTATTGACAGGTTTAAGGTCTAAGGCTGAGAAGGTTCATCAAGAAATGGACAGGATACTTGGGAGCATTGTAAGAGATCACAAGGACAGAGATACACAAACAGAAGCAATCCATGAAAAAGCAGAAGATATCGTTGATGTTCTGCTGAAGCTTCAGAAGCAGGACAACCTTGAACATCCTCTGTCTGATGAAATGATCAAAGCAACCATTTTGGACATATTCAATGCTGGAAGTGAAACTTCATCAAATACCATAGAGTGGACAATGGCAGAGTTGGTAAAAAACCCAAGGGTAATGGAGAAAGCACAAGCTGAGGTGAGAGAAGTCTATGAAGGAAAAGGTTATGTAGATGAAGCAAGTGTTGATGAACTGAAGTACTTGAAGTCAATCATCAAAGAAACATTGCGTATGCATCCTCCGGTTCCATTGTTACTCCCAAGGGAATGCAGTGAGAGCTGTGAGATTAATGGGTATGAGATTGCACCTAAAAGCAAGGTGATGGTTAATGTATGGGCAATAGGGAGGGATCCTGAGTATTGGCTTGAAGCTGAGAAATTTTACCCAGAAAGATTCATTGATAGCTCAGTGGATTACAGAGGAGCAGATTTTCAGCTCATTCCATTTGGTGCTGGAAGGAGGATGTGTCCTGGCATAACATTTGGTATTGCTAATGTTGAACTTTCACTTGCAAATTTGCTATTCCATTTTGATTGGAAGATGCCTAATGGGGAAAATCCTGAAGATCTAGACATGAATGAATCCTTTGGCTTGTCTGTAAAGAAAAAATATGATTTGGAGCTAATTCCTGTAAAGTATGGCTCATCTGCAATTTAA 1515 0.4205 MESELQIPSPAAIVSFFLLVVCIFWRFKTKNPNSKLPPGPPKIPILGNMHQIGAMPHQNLAKWAKKYGPLMHLKLGGLSSIVVSSPEMAKEVMKTHDIIFANRPYVLAMDIITYGSKSMSSSPYGSYWRQMRKISTFELLTPKRVESFRPIREEEVSKLVKEIALSEGSVISLTKKVNSMAYGMTARIAFGRECKDQEAYIELMKEVLKLVGGFSLVDLYPSIGVLQVLTGLRSKAEKVHQEMDRILGSIVRDHKDRDTQTEAIHEKAEDIVDVLLKLQKQDNLEHPLSDEMIKATILDIFNAGSETSSNTIEWTMAELVKNPRVMEKAQAEVREVYEGKGYVDEASVDELKYLKSIIKETLRMHPPVPLLLPRECSESCEINGYEIAPKSKVMVNVWAIGRDPEYWLEAEKFYPERFIDSSVDYRGADFQLIPFGAGRRMCPGITFGIANVELSLANLLFHFDWKMPNGENPEDLDMNESFGLSVKKKYDLELIPVKYGSSAI 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2473 504 CDD CYP71-like 66 492 - -
Prci2g2473 504 Gene3D Cytochrome P450 12 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g2473 504 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g2473 504 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g2473 504 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g2473 504 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g2473 504 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g2473 504 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g2473 504 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g2473 504 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g2473 504 FunFam Cytochrome P450 71D8 29 496 - -
Prci2g2473 504 Pfam Cytochrome P450 37 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g2473 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Prci2g2473 504 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g2473 504 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g2473 504 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g2473 504 SUPERFAMILY Cytochrome P450 37 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g2473 504 PANTHER OS08G0105600 PROTEIN 61 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2473 Prci-Chr2 20201841 20204487 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2473 15 497 Cytochrome P450 AT5G25180 43.381 9.05e-144 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2473 - - gmx:100818000 708.368