Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2472 ATGATAATGGGATTGTCATCAGAGTTCAGAGTTTTAGCTTTGTTTGCTTTTGTAATTTCCTTGGTGGGTTTATTAGCAGCAGAAAGTGGTGATAATGGGTCTGTGAGAGATTACATTACATGGGATGATTTGACAGTGGACGAAAATAGCTTAGCCTCGCAATCTAAGAGTGATCTTCAAGTTATTGTGGTTGACCAGAATGGTAATGGACATTCCTCTACAGTTCAAGGAGCTGTGGATATGGTGCCAGATCATAACACAGACAGGGTGAAGATATACATTTCCCCAGGAACTTACAGAGAAAAGGTGTTTGTGCCGAAGAACAAACCATATGTCTCATTCATAGGGAAAAGAAATCAAACACATGGTGTGGTGATTACTTGGAACAGCAAGTCATCAGACATAGGGTCAAATGGCCAAGAGTTGGGGACTTATGGTTCTGCAACTGTAGCAGTAGAATCTGATTACTTCTGTGCAAATAGGATCACATTTGAGAACTCTGTAGTTGCACAGGCTGGTGGACGAGGAATGCAAGGAGTAGCATTGAGGGTAGACAGTGAGAGAGCCATGTTCTATAAGGTTAAAATATTGGGAACACAGGACACTCTTTTGGATAACACAGGAACTCATTACTTCCTCAAGTGTTTCATCCAAGGAAAAGTTGATTTTATCTGTGGCAGTGCAAGATCATTCTATGAGGATTGTCGTCTCAAGTCAACAACCGAGAGCTATGGAGCAATTGCAGCTCATCACAGGGATACACCAAATGAAGATACAGGGTTTTCTTTTGTAGGCTGTTCAATCCAAGGAACTGGTAAGGTCTATCTTGGAAGAGCATGGGGAGATTATTCAAGAATAATATATTCAAACTGTTATATGGATGACATTATAATCCCAGAAGGATGGACTGAATGGAATCACCCTTCAAGAAAAAAGACTGCATTTTTTGGAGAGTTTCAGTGCCAAGGAAAAGGAGCAGATAGAAGTGGTAGAGTGCGATGGTCAAAATCTTTCACCAATGAGGAAGCAAAGCCTTTTCTGGACAGAAACTTCATAAATGGAGAACAATGGCTTAGATTGTAG 1083 0.4072 MIMGLSSEFRVLALFAFVISLVGLLAAESGDNGSVRDYITWDDLTVDENSLASQSKSDLQVIVVDQNGNGHSSTVQGAVDMVPDHNTDRVKIYISPGTYREKVFVPKNKPYVSFIGKRNQTHGVVITWNSKSSDIGSNGQELGTYGSATVAVESDYFCANRITFENSVVAQAGGRGMQGVALRVDSERAMFYKVKILGTQDTLLDNTGTHYFLKCFIQGKVDFICGSARSFYEDCRLKSTTESYGAIAAHHRDTPNEDTGFSFVGCSIQGTGKVYLGRAWGDYSRIIYSNCYMDDIIIPEGWTEWNHPSRKKTAFFGEFQCQGKGADRSGRVRWSKSFTNEEAKPFLDRNFINGEQWLRL 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2472 360 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 52 359 - -
Prci2g2472 360 FunFam Pectinesterase 57 360 - -
Prci2g2472 360 Pfam Pectinesterase 62 354 IPR000070 GO:0030599|GO:0042545
Prci2g2472 360 Gene3D - 58 360 IPR012334 -
Prci2g2472 360 SUPERFAMILY Pectin lyase-like 61 358 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2472 Prci-Chr2 20174249 20176589 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2472 11 312 Carbohydrate Esterase AT5G55590 53.727 2.88e-129 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2472 K01051 - gmx:100813382 498.819