Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2471 ATGATAATGGGATTGTCATCAGAGTTCAGAGTTTTAGCTTTGTTTGCTTTTGTAATTTCCTTGGTGGGTTTATTAGCAGCAGAAAGTGGTGATAATGGGTCTGTGAGAGATTACATTACATGGGATGATTTGACAGTGGACGAAAATAGCTTAGCCTCGCAATCTAAGAGTGATCTTCAAGTTATTGTGGTTGACCAGAATGGTAATGGACATTCCTCTACAGTTCAAGGAGCTGTGGATATGGTGCCAGATCATAACACAGACAGGGTGAAGATATACATTTCCCCAGGAACTTACAGAGAAAAGGTGTTTGTGCCGAAGAACAAACCATATGTCTCATTCATAGGGAAAAGAAATCAAACACATGGTGTGGTGATTACTTGGAACAGCAAGTCATCAGACATAGGGTCAAATGGCCAAGAGTTGGGGACTTATGGTTCTGCAACTGTAGCAGTAGAATCTGATTACTTCTGTGCAAATAGGATCACATTTGAGAACTCTGTAGTTGCACAGGCTGGTGGACGAGGAATGCAAGGAGTAGCATTGAGGGTAGACAGTGAGAGAGCCATGTTCTATAAGGTTAAAATATTGGGAACACAGGACACTCTTTTGGATAACACAGGAACTCATTACTTCCTCAAGTGTTTCATCCAAGGAAAAGTTGATTTTATCTGTGGCAGTGCAAGATCATTCTATGAGGATTGTCGTCTCAAGTCAACAACCGAGAGCTATGGAGCAATTGCAGCTCATCACAGGGATACACCAAATGAAGATACAGGGTTTTCTTTTGTAGGCTGTTCAATCCAAGGAACTGGACTGCATTTTTTGGAGAGTTTCAGTGCCAAGGAAAAGGAGCAGATAGAAGTGGTAGAGTGCGATGGTCAAAATCTTTCACCAATGAGGAAGCAAAGCCTTTTCTGGACAGAAACTTCATAA 936 0.4156 MIMGLSSEFRVLALFAFVISLVGLLAAESGDNGSVRDYITWDDLTVDENSLASQSKSDLQVIVVDQNGNGHSSTVQGAVDMVPDHNTDRVKIYISPGTYREKVFVPKNKPYVSFIGKRNQTHGVVITWNSKSSDIGSNGQELGTYGSATVAVESDYFCANRITFENSVVAQAGGRGMQGVALRVDSERAMFYKVKILGTQDTLLDNTGTHYFLKCFIQGKVDFICGSARSFYEDCRLKSTTESYGAIAAHHRDTPNEDTGFSFVGCSIQGTGLHFLESFSAKEKEQIEVVECDGQNLSPMRKQSLFWTETS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2471 311 Gene3D - 21 284 IPR012334 -
Prci2g2471 311 Pfam Pectinesterase 62 271 IPR000070 GO:0030599|GO:0042545
Prci2g2471 311 SUPERFAMILY Pectin lyase-like 61 270 IPR011050 -
Prci2g2471 311 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 52 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2471 Prci-Chr2 20174248 20176589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2471 11 276 Carbohydrate Esterase AT5G55590 52.448 6.63e-106 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2471 K01051 - gmx:100813382 371.318