Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2451 ATGGCCAGCAACGGTACAAGGGAGCCCTTGTTGCCCCAATCTCCTGATCCATCCGCTCCAAATACCAATGGCCAGCTTAGCAGGAGAAGGCATGTCCGTTGTAGAAGTGCTCCTCTTGCGAATCTTGACCCTCTTGAGAAGATCGGCGCTGGTTCAATTCAACTTTCCAACTCCGTATTTGGGAAGTTACATCCAAGTTTTCAAGAGGTGGCTATATATCTTGCAGGGTATCTAGGTATTGGAGCTGTGATCTTCTATCTTGTCAGGCAGCAGATCACAGGAAAGAAAACGGAGGGGTTTCTTGATGCTTTATACTTTACAATTGTCACAATGACCACAGTTGGATATGGAGACCTTGTGCCAAATAGTGACCTCACAAAACTACTTGCCTGTGCTTTTGTCTTCACAGGAATGGCACTAGTTGGTTTGATCTTAAGCAGAGCAGCGGACTATTTGGTTGAGAAGCAGGAAGTTTTGCTAATCAAAGCTCTGCATAGGCACAATAAAGTTGGTCCAACTCAAATTCTAAAGGAGGTTGAGGTCAATAAGACGAGATATAAATTTTTTGTGGTATTTTTCCTACTTTTGGTGCTCATTGTTACGGGGACAATTTTCTTAGTTTCTGTTGAGAAGTTGGATGTTATCGATGCCTTTTATTGTGTTTGTTCTACAATAACAACCCTGGGTTACGGTGATAAAAGCTTCTCAACTGAAGGAGGAAGAGTCTTTGCTGTGTTTTGGATATTGACAGGTCCTATTTGTTTAGGTCAGCTCTTCCTTTACATAGCTGAGCTGACCACTGAAAAAAGACAAAAGGATATCACTAAGATGGTTCTTACACGGAGGACAACCAAAGCGGATTTGGAGGCAGCTGATCTTGATGATGATGGAACTGTTGGGGTTGCTGAGTTCGTTATCTATAAACTGAGAGAGATGGGGAAGATAAGTGAAGAAGATATCTCACTCGTAATGCAGGAGTTTGAGGAGCTTGATGTTGATCAATCTGGTACTCTCTCGCTTTCTGATATAACTCTTGCTCAGGCACCTCATCCATCTTAG 1059 0.4278 MASNGTREPLLPQSPDPSAPNTNGQLSRRRHVRCRSAPLANLDPLEKIGAGSIQLSNSVFGKLHPSFQEVAIYLAGYLGIGAVIFYLVRQQITGKKTEGFLDALYFTIVTMTTVGYGDLVPNSDLTKLLACAFVFTGMALVGLILSRAADYLVEKQEVLLIKALHRHNKVGPTQILKEVEVNKTRYKFFVVFFLLLVLIVTGTIFLVSVEKLDVIDAFYCVCSTITTLGYGDKSFSTEGGRVFAVFWILTGPICLGQLFLYIAELTTEKRQKDITKMVLTRRTTKADLEAADLDDDGTVGVAEFVIYKLREMGKISEEDISLVMQEFEELDVDQSGTLSLSDITLAQAPHPS 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2451 352 SUPERFAMILY Voltage-gated potassium channels 181 282 - -
Prci2g2451 352 FunFam Two-pore potassium channel 1 168 276 - -
Prci2g2451 352 MobiDBLite consensus disorder prediction 1 27 - -
Prci2g2451 352 Gene3D - 64 158 - -
Prci2g2451 352 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 72 322 IPR003280 GO:0005267|GO:0016020|GO:0071805
Prci2g2451 352 Gene3D - 266 349 - -
Prci2g2451 352 FunFam Calcium-activated outward-rectifying potassium channel 1 64 159 - -
Prci2g2451 352 SUPERFAMILY Voltage-gated potassium channels 71 166 - -
Prci2g2451 352 Gene3D - 174 265 - -
Prci2g2451 352 ProSitePatterns EF-hand calcium-binding domain. 292 304 IPR018247 -
Prci2g2451 352 ProSitePatterns EF-hand calcium-binding domain. 331 343 IPR018247 -
Prci2g2451 352 Pfam Ion channel 194 266 IPR013099 -
Prci2g2451 352 Pfam Ion channel 73 153 IPR013099 -
Prci2g2451 352 PRINTS Two pore domain K+ channel signature 297 306 IPR003280 GO:0005267|GO:0016020|GO:0071805
Prci2g2451 352 PRINTS Two pore domain K+ channel signature 223 251 IPR003280 GO:0005267|GO:0016020|GO:0071805
Prci2g2451 352 SUPERFAMILY EF-hand 255 345 IPR011992 -
Prci2g2451 352 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2451 Prci-Chr2 19914979 19918784 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2451 59 347 Ion Channels AT5G55630 66.090 1.17e-140 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2451 K05389 - gmx:100800137 472.241