Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2443 ATGGGAAGCATCACGGAGATGCAGATGCAGGAGGAATTCATCTTCCGAAGCCCTCATTCCGGGGTTGTTCCGGTCCCGGAGAACGTGACGCTGCCGGAGTTCGTGCTTCAGAACTCAGAGTCATACGCCGACAAGGTGGCGTTCGTGGAGGTCGGGAGCCGGAAGGAGATAACGCACGGGCAGGTGGCGAGGGACACAGAGAGGTTTGCCAAGGCGTTGCGATCTTTGGGTGTGAGGAAAGGACATGTGGTGATTGTGGTGCTTCCGAATGTTGCTGAATATGCGATTATTGCATTGGGGATTATGGCCGCCGGCGCAGTGTTTTCCGGTGCCAATCCGGCAGCTCATGTTTCGGAGATCAAGAAGCAGGCTCAATCTTCTGATGCCAAGCTGATTGTCACCAATGGACTCAACCATGAAAAGGTCAAAGGTATAGGCCTACCAGTGATAGTGCTGGACGACGAGCCCATTGAAGACGCCATGAACTGGAAGAAGCTTCTAGAAGCAGCAGACCGAGCCGGCCAAACCGGTCCAAGAGAACCCATCTCACAAACCGACCTCTGTGCCATGCCTTTCTCCTCAGGAACCACCGGACTCTCCAAGGGCGTCATGCTAACTCACAGAAACCTCGTCGCCAACCTCTGCTCCACCCTCTTCGGAGTCGAACCGGAGATGGTGGGTCAGGTCACCACCCTAGGATTGCTTCCCTTCTTCCATATCTATGGCATCGCCGGAATCTGCTGCGCCACGCTGAGGAACAAAGGGACGGTGGTGGTGATGGGCCGATTCGAACTGAGAAGTTTCCTGAATGCTTTGATAGCTCACGAGGTCATGTTCGCTCCGATCGTGCCTCCGATCATTCTGAACTTGGTGAAGAATCCGATCGTGGATGAGTTCGATCTCTCTAAGCTCAAGCTTCAGGCCGTTCTCACGGCGGCGGCTCCTCTTGCACCGGAAGTTCTCACAGCGTTCGAAAATAAGTTCCCTGGTGTTCTTGTTCAGCAAGCGTATGGACTAACAGAACACAGCTGCATCACACTGACGCACGCACACAGAGGATTAGCGAACTCAAAGAGGAACTCAGTGGGCTTCATACTCCCAAATTTGGAAGTGAAGTTCATTGATCCTGACAGTGGCAAGCCCCTCCCAAGGAACACTTCTGGCGAGCTTTGTGTGAGAAGCCAGGCCGTCATGCAAGGTTACTACAAGCAAGTGGAAGAGACTGCACAGACAATTGATAAGAATGGGTGGCTTCACACAGGAGACATAGGCTTCATTGACGATGACGACAATGTGTTCATTGTTGATCGTATCAAGGAGTTGATTAAATACAAAGGCTTCCAAGTTGCCCCGGCAGAGCTAGAGGCCATTCTTCTATCTCATTCCTCTGTTGAAGATGCTGCCGTCGTGCCAATAGCAGATGAAGAAGCTGGAGAGATCCCAGGGGCAAGTGTGGTGATGAGCCCAGGTGCTCAAGAGACTGAAGAAGACATCATCAAGTTCGTTGCTTCCAACGTTGCTAATTACAAGAAAGTGAGAGTGCTTCACTTTGTCGACTCAATCCCTAAGTCTCCTTCTGGCAAGATCATGAGGAGGCTTGTTAGAGACAAAATGCTTCATAACATGCCTTCTCACTCCACTAATCCTTCTCATTCAACATCGGCCTGA 1668 0.5162 MGSITEMQMQEEFIFRSPHSGVVPVPENVTLPEFVLQNSESYADKVAFVEVGSRKEITHGQVARDTERFAKALRSLGVRKGHVVIVVLPNVAEYAIIALGIMAAGAVFSGANPAAHVSEIKKQAQSSDAKLIVTNGLNHEKVKGIGLPVIVLDDEPIEDAMNWKKLLEAADRAGQTGPREPISQTDLCAMPFSSGTTGLSKGVMLTHRNLVANLCSTLFGVEPEMVGQVTTLGLLPFFHIYGIAGICCATLRNKGTVVVMGRFELRSFLNALIAHEVMFAPIVPPIILNLVKNPIVDEFDLSKLKLQAVLTAAAPLAPEVLTAFENKFPGVLVQQAYGLTEHSCITLTHAHRGLANSKRNSVGFILPNLEVKFIDPDSGKPLPRNTSGELCVRSQAVMQGYYKQVEETAQTIDKNGWLHTGDIGFIDDDDNVFIVDRIKELIKYKGFQVAPAELEAILLSHSSVEDAAVVPIADEEAGEIPGASVVMSPGAQETEEDIIKFVASNVANYKKVRVLHFVDSIPKSPSGKIMRRLVRDKMLHNMPSHSTNPSHSTSA 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2443 555 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 537 - -
Prci2g2443 555 FunFam Long-chain-fatty-acid--CoA ligase FadD 19 439 - -
Prci2g2443 555 Pfam AMP-binding enzyme C-terminal domain 453 528 IPR025110 -
Prci2g2443 555 SUPERFAMILY Acetyl-CoA synthetase-like 25 540 - -
Prci2g2443 555 FunFam 4-coumarate--CoA ligase 2 440 541 - -
Prci2g2443 555 Gene3D - 13 439 IPR042099 -
Prci2g2443 555 Pfam AMP-binding enzyme 38 444 IPR000873 -
Prci2g2443 555 Gene3D - 440 541 IPR045851 -
Prci2g2443 555 ProSitePatterns Putative AMP-binding domain signature. 190 201 IPR020845 -
Prci2g2443 555 CDD 4CL 25 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2443 Prci-Chr2 19816683 19821777 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2443 6 539 Monolignol Biosynthesis Gene Families AT1G62940 73.606 0.0 785
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2443 K01904 - gmx:100814237 818.92