Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2437 ATGTGTTCAGCAAGCACCCTGCTTCTTTTCTTTCTCTTGTGCTTCTTTGATCCTACAACAGTGTTCGCACAACAAAACCTCACATTCGAATTCCCTTCCTTCACATCTCTTCGCAACATCACTCTCATTGGCGATTCCTTTCTTCGGAACGGCGTCGTCGGCCTCACCAGGTCTTCCGACGTTCCCACTTCCAGCGCCGGAGCCGTGATCTATGACAATCCCATCTGTCTCTTCGACCCACAATCAAACACTTCCTCTTCGTTCTCAACATCGTTCGCTTTCTCCGTCACCAACAACCTGAACAATCCTCCTTCCCTCGTTGATGGTTCCTTATCCTTCTTTCTGTTTCCCGCCAACCACACTCTTGGGAGCTCAGGCGGGTATTCGGGTCTCCTCTGTTCCTCCCAATTGACCTGTTCGGACTTCGTCGCCGTGGAATTCAACCCCAGTGATAATGGCGTTGAGTTGGATCTAAACGGCGTCGCTTTGATCAACGCCACCGGTGATACCATCTCACAGGGCATTGATCTCAAGAGTGGGGAATTGATCACAGCTTGGATCGATTACGACAGTGAAAAGAGGAAGCTCCTATTGTTCTTGAGTTCCAATTCTAGTTCAAACTTGAAGCCTGAGAACCCGATTCTGAATGTTGATGATCTTGACCTCTCTAGATATATCAATGAGACTGCGTATGTGGGGTTTTCTGCTTCTACTGAGGGAAGCACTGAGCTTCATCAGCTTGTGAGCTGGAGATTTCAGAGTAACGGATCTATTCCTGCAACATCACCAAAGTTTCATTCTCGTAATGTTTCTGATAGCTTTGTGAGTGCAACAGAGGACATTCATAAGAAATCCTCAAATAATTCCAGCAGTAAGCATGACAAAAGGCTTGGGTTAGGTGTAGCCATTGCTGGTCCAGCTTTTTTCTGTGTAGTTCTGTTAAGCTTGGGGTGTATTTCTGTACGAAAATGGAGGAATAGCAGCACACCGAAGAGAGTGAAAACTGAGTTAATGGCTTGTCCTAAGGAATTTAGTTACAAAGAATTGAAAGTAGCCACAAAAGGGTTTCACTCAAGTAGGATCATTGGCCAAGGATCATTTGGGACCGTTTACAAAGCCCTGTTTCTACCTTCGGGAACCATTGCCGCTGTGAAAAGGTCAAGACACTCTCATGATAGCAAAACAGAATTTCTAGCTGAACTTTCCATCATAGCTGGTTTGAGGCACAAGAATCTGGTTCAGCTTCAAGGTTGGTGTGTAGATAAAGGAGAATTGCTGCTTGTTTATGACTTCATGCCCAATGGAAGCTTAGACAAGATGCTCTATCAAGAATCTGAAGAATGCCAGAAGAACTTGTTGAACTGGTCTCGTAGGCTTAATATTGCTATTGGGTTGGCTTCTGTTCTGACTTACCTTCACCAAGAATGTGAGAAAAGAGTCATTCACCGAGACATTAAGACCGGAAACATATTGCTAGACGCAAATTACAACCCAAGGTTGGGTGATTTTGGATTGGCGAAGCTGATGGATCATGACGGAAGCCCAGTTTCAACATTAACAGCAGGAACAATGGGGTATCTTGCGCCTGAATACCTTCAGTATGGGATGGCTACTGAGAAAACTGATGCTTTCAGCTATGGTGTGGTTGTTCTTGAAGTGGCATGTGGGAGGAGGCCAATTGAAAGAGAAGGCCAAAACATGGTCAATTTGGTGGATTGGGTTTGGGGTCTTCACTCTCAGGGGAAGATACTTGAAGCAGCTGATAAAAGATTGAATGGAGAATTCACAGAGGAAGAGATGAAGAAACTGTTGCTCTTGGGGTTGAGCTGTGCAAACCCAGATAGTGCTGAAAGGCCCACTATGACCAGGGTTTTGCAGATTCTCAGCAACCATGAAGCAGCAAGCACACTTCTTGTGCCAAAGGTGAAGCCATGCCTCACCTTCTCTTGTAGCTTGCCTTTGAGTCTAGATGAGATTGTTTCAGAGAGTGATGAGGAGTCCAGTACTGACAAATCTTTGTGCGAGATAAGAATTGATTGA 2040 0.4525 MCSASTLLLFFLLCFFDPTTVFAQQNLTFEFPSFTSLRNITLIGDSFLRNGVVGLTRSSDVPTSSAGAVIYDNPICLFDPQSNTSSSFSTSFAFSVTNNLNNPPSLVDGSLSFFLFPANHTLGSSGGYSGLLCSSQLTCSDFVAVEFNPSDNGVELDLNGVALINATGDTISQGIDLKSGELITAWIDYDSEKRKLLLFLSSNSSSNLKPENPILNVDDLDLSRYINETAYVGFSASTEGSTELHQLVSWRFQSNGSIPATSPKFHSRNVSDSFVSATEDIHKKSSNNSSSKHDKRLGLGVAIAGPAFFCVVLLSLGCISVRKWRNSSTPKRVKTELMACPKEFSYKELKVATKGFHSSRIIGQGSFGTVYKALFLPSGTIAAVKRSRHSHDSKTEFLAELSIIAGLRHKNLVQLQGWCVDKGELLLVYDFMPNGSLDKMLYQESEECQKNLLNWSRRLNIAIGLASVLTYLHQECEKRVIHRDIKTGNILLDANYNPRLGDFGLAKLMDHDGSPVSTLTAGTMGYLAPEYLQYGMATEKTDAFSYGVVVLEVACGRRPIEREGQNMVNLVDWVWGLHSQGKILEAADKRLNGEFTEEEMKKLLLLGLSCANPDSAERPTMTRVLQILSNHEAASTLLVPKVKPCLTFSCSLPLSLDEIVSESDEESSTDKSLCEIRID 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2437 679 Pfam Legume lectin domain 27 260 IPR001220 GO:0030246
Prci2g2437 679 SUPERFAMILY Protein kinase-like (PK-like) 341 649 IPR011009 -
Prci2g2437 679 Gene3D - 24 256 - -
Prci2g2437 679 SMART serkin_6 356 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2437 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Prci2g2437 679 ProSitePatterns Protein kinases ATP-binding region signature. 362 385 IPR017441 GO:0005524
Prci2g2437 679 CDD STKc_IRAK 362 628 - -
Prci2g2437 679 PANTHER - 41 640 - -
Prci2g2437 679 Pfam Protein kinase domain 356 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2437 679 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 262 IPR013320 -
Prci2g2437 679 Gene3D Transferase(Phosphotransferase) domain 1 432 639 - -
Prci2g2437 679 Gene3D Phosphorylase Kinase; domain 1 318 431 - -
Prci2g2437 679 ProSiteProfiles Protein kinase domain profile. 356 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2437 679 FunFam L-type lectin-domain containing receptor kinase VIII.1 432 648 - -
Prci2g2437 679 FunFam L-type lectin-domain containing receptor kinase VIII.1 320 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2437 Prci-Chr2 19681023 19683387 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2437 3 668 Receptor kinase-like Gene Family AT5G55830 57.456 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Prci2g2437 Pkinase 7.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2437 - - qsa:O6P43_021312 796.964