Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2404 ATGTGTTGTCTTCATTCTGCAAATTCCTTCACAACCTCCAAAATGATCCCCTACATTATTATCATCAATTTTCTTCTATGCATGGCTTCTCAAATTCTTTTGCCAACTAGAGCTGCCATGGCCACTGGGTCAGAGGCTGATAGGCTTGCTTTGCTTGCTTTAAAGGATAAGCTGACCAATGGCATTCCAGAAGCTCTACCTTCATGGAATGATTCTGTTCACTTCTGTAAATGGCAAGGAGTTTCATGCAGTCTCCGTCACATGAGAGTCTTAGCATTGCATTTGACAAATCAAGATTTGGGTGGGACTCTTGCCCCAGTCTTAGGTAATTTAACTTTTCTTAAACTCCTCAATCTTTCCTCTAATGGATTGCATGGTGAAATTCCCGAACAAATTGGCCGTCTTAAACGGTTGCAATTTCTCAATTTGTACCAAAACTATCTCAAGGGAGAAATTCCTGAAAGCTTGGCTAATTGTTCTCAACTCCAAGAGATTTTTCTTAATCATAATAATTTGACAGGAAAAATTCCCTTTGGGTTTGGGTATATGCATCAACTTGAAGTATTGGCTCTCAATCGTAATGAATTTGCTGGTCCTGTTCCACCTTCCTTGGGAAATCTTTCGTCATTGGAAACCTTAGCTCTAGCGTATAATAATCTAGAAGGTCATTTACCTCAATCTCTTGGAAATGGGCATCTTTGTGGTGGAATACCTCAACTCAAGCTACCTAAATGCCCAAAGAAGAAGAAGGAGCATTTCAAAGTAAAAATCCTTATCATCGTGACAAGTGGTGTTCTTGCTTGTTTTGCAATGTGCCTAGTCATCATTTGCATGAGAAGAAAATATAAAAAGTTGTCTTCTTCCCCATCTTCTCCACAGAATATCCATTTGAGGGTTTCTTATAAGGAGCTACATGATGCAACCAATGGATTCTCTTCATCCAATTTGGTTGGTGTAGGAAGTTTTGGTTCTGTATACAAAGGAACTCTCCAACACTTTGAAAGACCTATTGCTGTAAAGGTACTAAATCTTGAAGCACATGGGGCATCCAAGAGTTTCATCACAGAATGCAAAACTCTTAGTAAAGTTCGGCATAGGAATCTTTTAAAGATTCTAACATCATGTTCAAGTATTGACTACAAAGGCAATAGTTTTAAGGCCCTTGTTTTTGAGTTCATGTCTAATGAGAGCTTGGAGAATTGGTTGTCAACAAATGAATGGGGTGAACCGAGGAATCTCAATTTCGCACAAAGATTAGATATAGCAGTTGATGTGGCTCATGCTTTGGATTATATTCATCATGATTTTGAGGAAGTTATTGTTCATTGTGACATCAAGCCAAGTAATGTTCTTCTTGATGATGATATGGTGGCACACTTAGGAGACTTTGGATTAGCTAGGCTTTTTCATGAGGCTGCAAGCTATTCTAGTGAAGGTCAAACTACATCCTCAGCAATTAAAGGAACTATTGGGTATATTCCCCCAGAGTACGGAGAAAGTGGCCAAGTTACAACACAAGGAGATATCTTTAGTTACGGGGTTCTCTTGTTAGAGATGCTCACTGGGAAGAAGCCAACAGATAACATGTTTAGTGGTGATCTAAGCCTATCTAAATATTGCAAGTTAGCATTGCCAGATGGAGTCCTTGAGATAGTGGATTCAAGTTTGCTTGTTCTATCTGATAGAGACCACAAGAAGATTATGCAAAATTCAGATATGGAACGTAACATACAAGAGTTCTTTGCAAGCTTTGCCAAGATTGGAGTTGCATGTTGTGAAAAATTTCCTGGTCAACGAATAGGCATAAAAGATGCTTTAGCAGAGTTGCTTACAATTAAGCAAAAGCTGTCCACTTTTAACATTGCCATATGA 1872 0.3878 MCCLHSANSFTTSKMIPYIIIINFLLCMASQILLPTRAAMATGSEADRLALLALKDKLTNGIPEALPSWNDSVHFCKWQGVSCSLRHMRVLALHLTNQDLGGTLAPVLGNLTFLKLLNLSSNGLHGEIPEQIGRLKRLQFLNLYQNYLKGEIPESLANCSQLQEIFLNHNNLTGKIPFGFGYMHQLEVLALNRNEFAGPVPPSLGNLSSLETLALAYNNLEGHLPQSLGNGHLCGGIPQLKLPKCPKKKKEHFKVKILIIVTSGVLACFAMCLVIICMRRKYKKLSSSPSSPQNIHLRVSYKELHDATNGFSSSNLVGVGSFGSVYKGTLQHFERPIAVKVLNLEAHGASKSFITECKTLSKVRHRNLLKILTSCSSIDYKGNSFKALVFEFMSNESLENWLSTNEWGEPRNLNFAQRLDIAVDVAHALDYIHHDFEEVIVHCDIKPSNVLLDDDMVAHLGDFGLARLFHEAASYSSEGQTTSSAIKGTIGYIPPEYGESGQVTTQGDIFSYGVLLLEMLTGKKPTDNMFSGDLSLSKYCKLALPDGVLEIVDSSLLVLSDRDHKKIMQNSDMERNIQEFFASFAKIGVACCEKFPGQRIGIKDALAELLTIKQKLSTFNIAI 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2404 623 ProSiteProfiles Protein kinase domain profile. 311 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2404 623 SUPERFAMILY L domain-like 44 232 - -
Prci2g2404 623 FunFam Leucine-rich repeat receptor-like protein kinase 44 202 - -
Prci2g2404 623 SMART serkin_6 311 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2404 623 Pfam Leucine rich repeat N-terminal domain 45 84 IPR013210 -
Prci2g2404 623 Gene3D Phosphorylase Kinase; domain 1 293 392 - -
Prci2g2404 623 Gene3D Ribonuclease Inhibitor 46 159 IPR032675 -
Prci2g2404 623 Gene3D Ribonuclease Inhibitor 160 233 IPR032675 -
Prci2g2404 623 Gene3D Transferase(Phosphotransferase) domain 1 393 621 - -
Prci2g2404 623 Pfam Protein kinase domain 313 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2404 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Prci2g2404 623 Pfam Leucine rich repeat 114 172 IPR001611 GO:0005515
Prci2g2404 623 SUPERFAMILY Protein kinase-like (PK-like) 290 609 IPR011009 -
Prci2g2404 623 ProSitePatterns Protein kinases ATP-binding region signature. 317 340 IPR017441 GO:0005524
Prci2g2404 623 FunFam LRR receptor-like serine/threonine-protein kinase EFR 281 392 - -
Prci2g2404 623 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 393 621 - -
Prci2g2404 623 PANTHER OS04G0122200 PROTEIN 116 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2404 Prci-Chr2 19137599 19141108 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2404 13 615 Receptor kinase-like Gene Family AT3G47570 38.162 2.44e-132 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci2g2404 Pkinase 6.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2404 - - gsj:114384365 501.901