Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2403 ATGTGTTGTCTTCATTCTGCAAATTCCTTCACAACCTCCAAAATGATCCCCTACATTATTATCATCAATTTTCTTCTATGCATGGCTTCTCAAATTCTTTTGCCAACTAGAGCTGCCATGGCCACTGGGTCAGAGGCTGATAGGCTTGCTTTGCTTGCTTTAAAGGATAAGCTGACCAATGGCATTCCAGAAGCTCTACCTTCATGGAATGATTCTGTTCACTTCTGTAAATGGCAAGGAGTTTCATGCAGTCTCCGTCACATGAGAGTCTTAGCATTGCATTTGACAAATCAAGATTTGGGTGGGACTCTTGCCCCAGTCTTAGGAAAAATTCCCTTTGGGTTTGGGTATATGCATCAACTTGAAGTATTGGCTCTCAATCGTAATGAATTTGCTGGTCCTGTTCCACCTTCCTTGGGAAATCTTTCGTCATTGGAAACCTTAGCTCTAGCGTATAATAATCTAGAAGGTCATTTACCTCAATCTCTTGGTAGGTTGTCTAATTTGAAATCACTCTTTCTATCTCATAACAATTTTTTTGGCATAATTCCTCCTTCACTTTATAATCTTTCTCGGATGGACTATTTTGACTTGCCTTTCAACTATTTGTCTGGAGCTATTCCTTTGAATATAGACATTGCTTTCCCAAATCTTCGATATTTTAATGTTGGACACAACTTGTTGAGGGGAACTATCCCAATTTCATTATCCAACATCTCTCAATTGCAGTTATTTGCAATATATGAAAATGCTTTTAGTGGCCTAGTCCCTACCAGTTTTGGGAGATTGCAGAACCTTCGTAAATTTGAAATTGATGCAAATAATTTTGGGAGTGATGAAGGTCATGACCTGGATTTCCTCTCATCATTAACAAATTGTAGTCAATTGAATTTGATAGAGATGTTAGATAATAAATTTAGAGGTGTATTGCCAAATTCAATTGGGAATCTCTCTTCCCAGCTTGATTCGCTCAGTATGGGATTCAATCATATCTTTGGAAGCATACCTAATGAGATTGGGCAACTTGATGGCTTAACTTATCTTGTTTTGGAACATAACTTTCTTCAAGGCACAATCCCACATTCAATTGGAAAGCTTGGAGAGCTTGGAAAGCTTGCCTTAGGAGACAATCAATTATGTGGAAGAATTCCTGATTTCTTTGGAAATCTTACTAAGTTGTTAGATTTAGAATTGTTTAATAACAATTTTGAGGGAACCATTCCAATAAGCATCAAACATTGTAAAGGTATGCAATCCTTGTACCTGAATCAAAATAACTTGAGTGGTAATATACCAAATCAAACTTTTGGTCCTCTAGAAAGCTTATTATATCTTGACATGTCTTCCAATTCCTTGACTGGTCCAATTCCATTTCAGATTGGTAACATGAAACAACTAGTGAAATTGAAATTGAGTCAAAACAATTTTTTTAGTGACATTCCAATGGAACTTGGGGGATGCTTGCAGTTGACAAATCTTGATATGAGTAATAACTTCCTTCATGGAAGTATCCCCTCATCATTTAGTTCCTTAAAATCTCTGATCAGCTTAGACCTTTCCAACAATAACTTGTCAGGAAAAATCCCACAAGAATTAAATGGTCTTTCAATATTGAAGACTTTGAACCTATCTCACAACCATTTCTTTGGCGAGGTTCCAAAAGGAGGAGTGTTTGATAATGTCACAGCTATTTCACTCACAGGAAATGGGCATCTTTGTGGTGGAATACCTCAACTCAAGCTACCTAAATGCCCAAAGAAGAAGAAGGAGCATTTCAAAGTAAAAATCCTTATCATCGTGACAAGTGGTGTTCTTGCTTGTTTTGCAATGTGCCTAGTCATCATTTGCATGAGAAGAAAATATAAAAAGTTGTCTTCTTCCCCATCTTCTCCACAGAATATCCATTTGAGGGTTTCTTATAAGGAGCTACATGATGCAACCAATGGATTCTCTTCATCCAATTTGGTTGGTGTAGGAAGTTTTGGTTCTGTATACAAAGGAACTCTCCAACACTTTGAAAGACCTATTGCTGTAAAGGTACTAAATCTTGAAGCACATGGGGCATCCAAGAGTTTCATCACAGAATGCAAAACTCTTAGTAAAGTTCGGCATAGGAATCTTTTAAAGATTCTAACATCATGTTCAAGTATTGACTACAAAGGCAATAGTTTTAAGGCCCTTGTTTTTGAGTTCATGTCTAATGAGAGCTTGGAGAATTGGTTGTCAACAAATGAATGGGGTGAACCGAGGAATCTCAATTTCGCACAAAGATTAGATATAGCAGTTGATGTGGCTCATGCTTTGGATTATATTCATCATGATTTTGAGGAAGTTATTGTTCATTGTGACATCAAGCCAAGTAATGTTCTTCTTGATGATGATATGGTGGCACACTTAGGAGACTTTGGATTAGCTAGGCTTTTTCATGAGGCTGCAAGCTATTCTAGTGAAGGTCAAACTACATCCTCAGCAATTAAAGGAACTATTGGGTATATTCCCCCAGAGTACGGAGAAAGTGGCCAAGTTACAACACAAGGAGATATCTTTAGTTACGGGGTTCTCTTGTTAGAGATGCTCACTGGGAAGAAGCCAACAGATAACATGTTTAGTGGTGATCTAAGCCTATCTAAATATTGCAAGTTAGCATTGCCAGATGGAGTCCTTGAGATAGTGGATTCAAGTTTGCTTGTTCTATCTGATAGAGACCACAAGAAGATTATGCAAAATTCAGATATGGAACGTAACATACAAGAGTTCTTTGCAAGCTTTGCCAAGATTGGAGTTGCATGTTGTGAAAAATTTCCTGGTCAACGAATAGGCATAAAAGATGCTTTAGCAGAGTTGCTTACAATTAAGCAAAAGCTGTCCACTTTTAACATTGCCATATGA 2889 0.3749 MCCLHSANSFTTSKMIPYIIIINFLLCMASQILLPTRAAMATGSEADRLALLALKDKLTNGIPEALPSWNDSVHFCKWQGVSCSLRHMRVLALHLTNQDLGGTLAPVLGKIPFGFGYMHQLEVLALNRNEFAGPVPPSLGNLSSLETLALAYNNLEGHLPQSLGRLSNLKSLFLSHNNFFGIIPPSLYNLSRMDYFDLPFNYLSGAIPLNIDIAFPNLRYFNVGHNLLRGTIPISLSNISQLQLFAIYENAFSGLVPTSFGRLQNLRKFEIDANNFGSDEGHDLDFLSSLTNCSQLNLIEMLDNKFRGVLPNSIGNLSSQLDSLSMGFNHIFGSIPNEIGQLDGLTYLVLEHNFLQGTIPHSIGKLGELGKLALGDNQLCGRIPDFFGNLTKLLDLELFNNNFEGTIPISIKHCKGMQSLYLNQNNLSGNIPNQTFGPLESLLYLDMSSNSLTGPIPFQIGNMKQLVKLKLSQNNFFSDIPMELGGCLQLTNLDMSNNFLHGSIPSSFSSLKSLISLDLSNNNLSGKIPQELNGLSILKTLNLSHNHFFGEVPKGGVFDNVTAISLTGNGHLCGGIPQLKLPKCPKKKKEHFKVKILIIVTSGVLACFAMCLVIICMRRKYKKLSSSPSSPQNIHLRVSYKELHDATNGFSSSNLVGVGSFGSVYKGTLQHFERPIAVKVLNLEAHGASKSFITECKTLSKVRHRNLLKILTSCSSIDYKGNSFKALVFEFMSNESLENWLSTNEWGEPRNLNFAQRLDIAVDVAHALDYIHHDFEEVIVHCDIKPSNVLLDDDMVAHLGDFGLARLFHEAASYSSEGQTTSSAIKGTIGYIPPEYGESGQVTTQGDIFSYGVLLLEMLTGKKPTDNMFSGDLSLSKYCKLALPDGVLEIVDSSLLVLSDRDHKKIMQNSDMERNIQEFFASFAKIGVACCEKFPGQRIGIKDALAELLTIKQKLSTFNIAI 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2403 962 ProSitePatterns Protein kinases ATP-binding region signature. 656 679 IPR017441 GO:0005524
Prci2g2403 962 FunFam LRR receptor-like serine/threonine-protein kinase EFR 620 731 - -
Prci2g2403 962 PANTHER LEUCINE RICH REPEAT KINASE 2 388 954 - -
Prci2g2403 962 SMART LRR_typ_2 166 190 IPR003591 -
Prci2g2403 962 SMART LRR_typ_2 142 165 IPR003591 -
Prci2g2403 962 SMART LRR_typ_2 463 487 IPR003591 -
Prci2g2403 962 SMART LRR_typ_2 511 534 IPR003591 -
Prci2g2403 962 SMART LRR_typ_2 535 560 IPR003591 -
Prci2g2403 962 SMART LRR_typ_2 342 366 IPR003591 -
Prci2g2403 962 SUPERFAMILY L domain-like 299 574 - -
Prci2g2403 962 Gene3D Ribonuclease Inhibitor 214 282 IPR032675 -
Prci2g2403 962 Pfam Leucine rich repeat 489 548 IPR001611 GO:0005515
Prci2g2403 962 Pfam Leucine Rich Repeat 168 190 IPR001611 GO:0005515
Prci2g2403 962 SUPERFAMILY L domain-like 44 319 - -
Prci2g2403 962 Gene3D Phosphorylase Kinase; domain 1 632 731 - -
Prci2g2403 962 Gene3D Ribonuclease Inhibitor 44 213 IPR032675 -
Prci2g2403 962 Pfam Protein kinase domain 652 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2403 962 Pfam Leucine rich repeat N-terminal domain 45 84 IPR013210 -
Prci2g2403 962 FunFam Nuclear pore complex protein NUP107 44 209 - -
Prci2g2403 962 FunFam LRR receptor-like serine/threonine-protein kinase EFR 282 590 - -
Prci2g2403 962 Gene3D Ribonuclease Inhibitor 283 593 IPR032675 -
Prci2g2403 962 Gene3D Transferase(Phosphotransferase) domain 1 732 960 - -
Prci2g2403 962 ProSitePatterns Serine/Threonine protein kinases active-site signature. 779 791 IPR008271 GO:0004672|GO:0006468
Prci2g2403 962 ProSiteProfiles Protein kinase domain profile. 650 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2403 962 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 732 960 - -
Prci2g2403 962 SMART serkin_6 650 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2403 962 SUPERFAMILY Protein kinase-like (PK-like) 629 948 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2403 Prci-Chr2 19137595 19141135 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2403 45 954 Receptor kinase-like Gene Family AT3G47570 40.565 0.0 708
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci2g2403 Pkinase 1.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2403 - - ahf:112766919 879.782