Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2402 ATGTGTTGTCTTCATTCTGCAAATTCCTTCACAACCTCCAAAATGATCCCCTACATTATTATCATCAATTTTCTTCTATGCATGGCTTCTCAAATTCTTTTGCCAACTAGAGCTGCCATGGCCACTGGGTCAGAGGCTGATAGGCTTGCTTTGCTTGCTTTAAAGGATAAGCTGACCAATGGCATTCCAGAAGCTCTACCTTCATGGAATGATTCTGTTCACTTCTGTAAATGGCAAGGAGTTTCATGCAGTCTCCGTCACATGAGAGTCTTAGCATTGCATTTGACAAATCAAGATTTGGGTGGGACTCTTGCCCCAGTCTTAGGTAATTTAACTTTTCTTAAACTCCTCAATCTTTCCTCTAATGGATTGCATGGTGAAATTCCCGAACAAATTGGCCGTCTTAAACGGTTGCAATTTCTCAATTTGTACCAAAACTATCTCAAGGGAGAAATTCCTGAAAGCTTGGCTAATTGTTCTCAACTCCAAGAGATTTTTCTTAATCATAATAATTTGACAGGAAAAATTCCCTTTGGGTTTGGGTATATGCATCAACTTGAAGTATTGGCTCTCAATCGTAATGAATTTGCTGGTCCTGTTCCACCTTCCTTGGGAAATCTTTCGTCATTGGAAACCTTAGCTCTAGCGTATAATAATCTAGAAGGTCATTTACCTCAATCTCTTGGTAGGTTGTCTAATTTGAAATCACTCTTTCTATCTCATAACAATTTTTTTGGCATAATTCCTCCTTCACTTTATAATCTTTCTCGGATGGACTATTTTGACTTGCCTTTCAACTATTTGTCTGGAGCTATTCCTTTGAATATAGACATTGCTTTCCCAAATCTTCGATATTTTAATGTTGGACACAACTTGTTGAGGGGAACTATCCCAATTTCATTATCCAACATCTCTCAATTGCAGTTATTTGCAATATATGAAAATGCTTTTAGTGGCCTAGTCCCTACCAGTTTTGGGAGATTGCAGAACCTTCGTAAATTTGAAATTGATGCAAATAATTTTGGGAGTGATGAAGGTCATGACCTGGATTTCCTCTCATCATTAACAAATTGTAGTCAATTGAATTTGATAGAGATGTTAGATAATAAATTTAGAGGTGTATTGCCAAATTCAATTGGGAATCTCTCTTCCCAGCTTGATTCGCTCAGTATGGGATTCAATCATATCTTTGGAAGCATACCTAATGAGATTGGGCAACTTGATGGCTTAACTTATCTTGTTTTGGAACATAACTTTCTTCAAGGCACAATCCCACATTCAATTGGAAAGCTTGGAGAGCTTGGAAAGCTTGCCTTAGGAGACAATCAATTATGTGGAAGAATTCCTGATTTCTTTGGAAATCTTACTAAGTTGTTAGATTTAGAATTGTTTAATAACAATTTTGAGGGAACCATTCCAATAAGCATCAAACATTGTAAAGGTATGCAATCCTTGTACCTGAATCAAAATAACTTGAGTGGTAATATACCAAATCAAACTTTTGGTCCTCTAGAAAGCTTATTATATCTTGACATGTCTTCCAATTCCTTGACTGGTCCAATTCCATTTCAGATTGGTAACATGAAACAACTAGTGAAATTGAAATTGAGTCAAAACAATTTTTTTAGTGACATTCCAATGGAACTTGGGGGATGCTTGCAGTTGACAAATCTTGATATGAGTAATAACTTCCTTCATGGAAGTATCCCCTCATCATTTAGTTCCTTAAAATCTCTGATCAGCTTAGACCTTTCCAACAATAACTTGTCAGGAAAAATCCCACAAGAATTAAATGGTCTTTCAATATTGAAGACTTTGAACCTATCTCACAACCATTTCTTTGGCGAGGTTCCAAAAGGAGGAGTGTTTGATAATGTCACAGCTATTTCACTCACAGGAAATGGGCATCTTTGTGGTGGAATACCTCAACTCAAGCTACCTAAATGCCCAAAGAAGAAGAAGGAGCATTTCAAAGTAAAAATCCTTATCATCGTGACAAGTGGTGTTCTTGCTTGTTTTGCAATGTGCCTAGTCATCATTTGCATGAGAAGAAAATATAAAAAGTTGTCTTCTTCCCCATCTTCTCCACAGAATATCCATTTGAGGGTTTCTTATAAGGAGCTACATGATGCAACCAATGGATTCTCTTCATCCAATTTGGTTGGTGTAGGAAGTTTTGGTTCTGTATACAAAGGAACTCTCCAACACTTTGAAAGACCTATTGCTGTAAAGGTACTAAATCTTGAAGCACATGGGGCATCCAAGAGTTTCATCACAGAATGCAAAACTCTTAGTAAAGTTCGGCATAGGAATCTTTTAAAGATTCTAACATCATGTTCAAGTATTGACTACAAAGGCAATAGTTTTAAGGCCCTTGTTTTTGAGTTCATGTCTAATGAGAGCTTGGAGAATTGGTTGTCAACAAATGAATGGGGTGAACCGAGGAATCTCAATTTCGCACAAAGATTAGATATAGCAGTTGATGTGGCTCATGCTTTGGATTATATTCATCATGATTTTGAGGAAGTTATTGTTCATTGTGACATCAAGCCAAGTAATGTTCTTCTTGATGATGATATGGTGGCACACTTAGGAGACTTTGGATTAGCTAGGCTTTTTCATGAGGCTGCAAGCTATTCTAGTGAAGGTCAAACTACATCCTCAGCAATTAAAGGAACTATTGGGTATATTCCCCCAGAGTACGGAGAAAGTGGCCAAGTTACAACACAAGGAGATATCTTTAGTTACGGGGTTCTCTTGTTAGAGATGCTCACTGGGAAGAAGCCAACAGATAACATGTTTAGTGGTGATCTAAGCCTATCTAAATATTGCAAGTTAGCATTGCCAGATGGAGTCCTTGAGATAGTGGATTCAAGTTTGCTTGTTCTATCTGATAGAGACCACAAGAAGATTATGCAAAATTCAGATATGGAACGTAACATACAAGAGTTCTTTGCAAGCTTTGCCAAGATTGGAGTTGCATGTTGTGAAAAATTTCCTGGTCAACGAATAGGCATAAAAGATGCTTTAGCAGAGTTGCTTACAATTAAGCAAAAGCTGTCCACTTTTAACATTGCCATATGA 3084 0.3729 MCCLHSANSFTTSKMIPYIIIINFLLCMASQILLPTRAAMATGSEADRLALLALKDKLTNGIPEALPSWNDSVHFCKWQGVSCSLRHMRVLALHLTNQDLGGTLAPVLGNLTFLKLLNLSSNGLHGEIPEQIGRLKRLQFLNLYQNYLKGEIPESLANCSQLQEIFLNHNNLTGKIPFGFGYMHQLEVLALNRNEFAGPVPPSLGNLSSLETLALAYNNLEGHLPQSLGRLSNLKSLFLSHNNFFGIIPPSLYNLSRMDYFDLPFNYLSGAIPLNIDIAFPNLRYFNVGHNLLRGTIPISLSNISQLQLFAIYENAFSGLVPTSFGRLQNLRKFEIDANNFGSDEGHDLDFLSSLTNCSQLNLIEMLDNKFRGVLPNSIGNLSSQLDSLSMGFNHIFGSIPNEIGQLDGLTYLVLEHNFLQGTIPHSIGKLGELGKLALGDNQLCGRIPDFFGNLTKLLDLELFNNNFEGTIPISIKHCKGMQSLYLNQNNLSGNIPNQTFGPLESLLYLDMSSNSLTGPIPFQIGNMKQLVKLKLSQNNFFSDIPMELGGCLQLTNLDMSNNFLHGSIPSSFSSLKSLISLDLSNNNLSGKIPQELNGLSILKTLNLSHNHFFGEVPKGGVFDNVTAISLTGNGHLCGGIPQLKLPKCPKKKKEHFKVKILIIVTSGVLACFAMCLVIICMRRKYKKLSSSPSSPQNIHLRVSYKELHDATNGFSSSNLVGVGSFGSVYKGTLQHFERPIAVKVLNLEAHGASKSFITECKTLSKVRHRNLLKILTSCSSIDYKGNSFKALVFEFMSNESLENWLSTNEWGEPRNLNFAQRLDIAVDVAHALDYIHHDFEEVIVHCDIKPSNVLLDDDMVAHLGDFGLARLFHEAASYSSEGQTTSSAIKGTIGYIPPEYGESGQVTTQGDIFSYGVLLLEMLTGKKPTDNMFSGDLSLSKYCKLALPDGVLEIVDSSLLVLSDRDHKKIMQNSDMERNIQEFFASFAKIGVACCEKFPGQRIGIKDALAELLTIKQKLSTFNIAI 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2402 1027 Gene3D Phosphorylase Kinase; domain 1 697 796 - -
Prci2g2402 1027 Gene3D Transferase(Phosphotransferase) domain 1 797 1025 - -
Prci2g2402 1027 Gene3D Ribonuclease Inhibitor 347 658 IPR032675 -
Prci2g2402 1027 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 797 1025 - -
Prci2g2402 1027 Gene3D Ribonuclease Inhibitor 202 346 IPR032675 -
Prci2g2402 1027 PANTHER OS04G0122200 PROTEIN 229 1018 - -
Prci2g2402 1027 SMART LRR_typ_2 111 135 IPR003591 -
Prci2g2402 1027 SMART LRR_typ_2 600 625 IPR003591 -
Prci2g2402 1027 SMART LRR_typ_2 528 552 IPR003591 -
Prci2g2402 1027 SMART LRR_typ_2 231 255 IPR003591 -
Prci2g2402 1027 SMART LRR_typ_2 207 230 IPR003591 -
Prci2g2402 1027 SMART LRR_typ_2 576 599 IPR003591 -
Prci2g2402 1027 SMART LRR_typ_2 407 431 IPR003591 -
Prci2g2402 1027 ProSitePatterns Serine/Threonine protein kinases active-site signature. 844 856 IPR008271 GO:0004672|GO:0006468
Prci2g2402 1027 ProSitePatterns Protein kinases ATP-binding region signature. 721 744 IPR017441 GO:0005524
Prci2g2402 1027 SUPERFAMILY L domain-like 357 639 - -
Prci2g2402 1027 ProSiteProfiles Protein kinase domain profile. 715 1015 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2402 1027 Gene3D Ribonuclease Inhibitor 44 201 IPR032675 -
Prci2g2402 1027 SMART serkin_6 715 1014 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2402 1027 FunFam LRR receptor-like serine/threonine-protein kinase EFR 347 655 - -
Prci2g2402 1027 SUPERFAMILY L domain-like 44 341 - -
Prci2g2402 1027 FunFam Leucine-rich repeat receptor protein kinase EMS1 202 279 - -
Prci2g2402 1027 FunFam Leucine-rich repeat receptor-like protein kinase 44 201 - -
Prci2g2402 1027 SUPERFAMILY Protein kinase-like (PK-like) 694 1013 IPR011009 -
Prci2g2402 1027 FunFam LRR receptor-like serine/threonine-protein kinase EFR 684 796 - -
Prci2g2402 1027 Pfam Leucine rich repeat 482 541 IPR001611 GO:0005515
Prci2g2402 1027 Pfam Leucine rich repeat 554 613 IPR001611 GO:0005515
Prci2g2402 1027 Pfam Leucine rich repeat 185 244 IPR001611 GO:0005515
Prci2g2402 1027 Pfam Protein kinase domain 717 1010 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2402 1027 Pfam Leucine rich repeat N-terminal domain 45 84 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2402 Prci-Chr2 19137595 19141135 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2402 45 1019 Receptor kinase-like Gene Family AT3G47570 43.391 0.0 789
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci2g2402 Pkinase 1.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2402 - - gmx:100777490 1007.28