Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2401 ATGCTTCATACTCATCTCCTTCCCTTATTGACCTTAGTATTGACCTGGTCGTGCTGGATTCTTGATGGCGTCGTTTCGGATTCCCAGGCCAATATTTTGAAGCCCATCGCATGCACACCGTTCAACCAATTCGTCGTCTCCAACATCACCATCTTCGAAGAGAACAAAAACGCAACGTTGCGAGACATCAGAGATCAGATCAGTGACCAGAACAAGCTTTTCGTCACGGCGCAGCAAGGCGCTTTTGGAAACCCTGCTGTCTCCACTCTTTTTCAATGCAGAAACTACCTCCCCGTCGCCGACTGTGTCGCCTGCTTTGACGTCGCCGCCCCCGACATCCTCAGCTGCCCCGCCGGAGCCCCCGGTGCCCATGTCGCCTACGATGGATGCTTCCTCAGGTACGACGTGGTGAGCACCTTCTTTGACGACACAACAGATACTATAAGTACAGCATCATGTGGAAATCAGACTATTACAGAAGAACCCACAACATTTACCTCATCCGTGCAACAAGTGCTCAAGAATCTCCAAACTGTAACACCCACAACCACAAGCTTCTTTGCAGCCACAAAGATGAAAGTGCCTAATAATAATAATGGCCCAACAACTATCTTTGCAATTGCTCAATGCACTGAAACACTCACACAGAGTACATGTGAGTCTTGCTTGAGCAGTGGCTCCAACAACATGCAGATTTGTCTTCCCAATTCAGAAGGTAGGGCCATTGCTGATGGATGTTTCATGAGATATTCCACCACTTCCTTCTTTCCTGATAACTACCAGACCTCTGATATCACTCCCTCCTTCAAACAAGGTTCAAGCAACATAGGGGTCATTATTGGTGGAGTTGTTGGAGGTGTAGCTCTTGTTTCATTGATCCTCCTCGTACTGTTTTGCTTGACTAAACGACCAAAAAGGAATAAGGAGGTTCCTAGAGGAGAAATAATTGGAGCAAGAAAGTTGAAAGGCCCAGGTAATTACAGTTACAGGGAATTGATGTCTGCAACCAAGAATTTTAGTGAAGAAAATAAACTAGGAGAAGGAGGATTCGGGGTTGTATACAAGGGTGTTTTGAAGAATGGGAAAGTAGTTGCAGTGAAGAAATTAACTTTGCGCCACTTGCACTCCAATAAGGTGGAGGAAGAATTTGAGAGTGAGGTGAAGCTTATAAGTAATGTTCATCATCGAAATCTCATTCGACTTCTAGGATATTGTAGCCATGGCTGTAGCAGAATACTTGTTTATGAATACATGAAAAACAAGAGTCTTGACTATTTTTTATTTGGTAAGCTTCTATCAACAGACAAAACTTATAAGAAATTCTATAGGCATTAG 1335 0.4419 MLHTHLLPLLTLVLTWSCWILDGVVSDSQANILKPIACTPFNQFVVSNITIFEENKNATLRDIRDQISDQNKLFVTAQQGAFGNPAVSTLFQCRNYLPVADCVACFDVAAPDILSCPAGAPGAHVAYDGCFLRYDVVSTFFDDTTDTISTASCGNQTITEEPTTFTSSVQQVLKNLQTVTPTTTSFFAATKMKVPNNNNGPTTIFAIAQCTETLTQSTCESCLSSGSNNMQICLPNSEGRAIADGCFMRYSTTSFFPDNYQTSDITPSFKQGSSNIGVIIGGVVGGVALVSLILLVLFCLTKRPKRNKEVPRGEIIGARKLKGPGNYSYRELMSATKNFSEENKLGEGGFGVVYKGVLKNGKVVAVKKLTLRHLHSNKVEEEFESEVKLISNVHHRNLIRLLGYCSHGCSRILVYEYMKNKSLDYFLFGKLLSTDKTYKKFYRH 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2401 444 SUPERFAMILY Protein kinase-like (PK-like) 323 431 IPR011009 -
Prci2g2401 444 Pfam Salt stress response/antifungal 153 252 IPR002902 -
Prci2g2401 444 Pfam Salt stress response/antifungal 49 135 IPR002902 -
Prci2g2401 444 ProSiteProfiles Gnk2-homologous domain profile. 146 255 IPR002902 -
Prci2g2401 444 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 91 430 - -
Prci2g2401 444 Gene3D Phosphorylase Kinase; domain 1 303 417 - -
Prci2g2401 444 FunFam Cysteine-rich receptor-like protein kinase 2 304 417 - -
Prci2g2401 444 Pfam Protein kinase domain 340 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2401 444 Gene3D - 145 255 IPR038408 -
Prci2g2401 444 Gene3D - 36 138 IPR038408 -
Prci2g2401 444 ProSitePatterns Protein kinases ATP-binding region signature. 345 368 IPR017441 GO:0005524
Prci2g2401 444 ProSiteProfiles Protein kinase domain profile. 339 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2401 444 FunFam Cysteine-rich receptor-like protein kinase 2 148 255 - -
Prci2g2401 444 ProSiteProfiles Gnk2-homologous domain profile. 33 139 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2401 Prci-Chr2 19122169 19127063 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2401 83 428 Receptor kinase-like Gene Family AT1G70530 36.080 2.81e-55 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2401 Pkinase 1.3e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2401 - - pcin:129302253 826.239