Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2399 ATGCTTCATACTCATCTCCTTCCCTTATTGACCTTAGTATTGACCTGGTCGTGCTGGATTCTTGATGGCGTCGTTTCGGATTCCCAGGCCAATATTTTGAAGCCCATCGCATGCACACCGTTCAACCAATTCGTCGTCTCCAACATCACCATCTTCGAAGAGAACAAAAACGCAACGTTGCGAGACATCAGAGATCAGATCAGTGACCAGAACAAGCTTTTCGTCACGGCGCAGCAAGGCGCTTTTGGAAACCCTGCTGTCTCCACTCTTTTTCAATGCAGAAACTACCTCCCCGTCGCCGACTGTGTCGCCTGCTTTGACGTCGCCGCCCCCGACATCCTCAGCTGCCCCGCCGGAGCCCCCGGTGCCCATGTCGCCTACGATGGATGCTTCCTCAGGTACGACGTGGTGAGCACCTTCTTTGACGACACAACAGATACTATAAGTACAGCATCATGTGGAAATCAGACTATTACAGAAGAACCCACAACATTTACCTCATCCGTGCAACAAGTGCTCAAGAATCTCCAAACTGTAACACCCACAACCACAAGCTTCTTTGCAGCCACAAAGATGAAAGTGCCTAATAATAATAATGGCCCAACAACTATCTTTGCAATTGCTCAATGCACTGAAACACTCACACAGAGTACATGTGAGTCTTGCTTGAGCAGTGGCTCCAACAACATGCAGATTTGTCTTCCCAATTCAGAAGGTAGGGCCATTGCTGATGGATGTTTCATGAGATATTCCACCACTTCCTTCTTTCCTGATAACTACCAGACCTCTGATATCACTCCCTCCTTCAAACAAGGTTCAAGCAACATAGGGGTCATTATTGGTGGAGTTGTTGGAGGTGTAGCTCTTGTTTCATTGATCCTCCTCGTACTGTTTTGCTTGACTAAACGACCAAAAAGGAATAAGGAGGTTCCTAGAGGAGAAATAATTGGAGCAAGAAAGTTGAAAGGCCCAGGTAATTACAGTTACAGGGAATTGATGTCTGCAACCAAGAATTTTAGTGAAGAAAATAAACTAGGAGAAGGAGGATTCGGGGTTGTATACAAGGGTGTTTTGAAGAATGGGAAAGTAGTTGCAGTGAAGAAATTAACTTTGCGCCACTTGCACTCCAATAAGGTGGAGGAAGAATTTGAGAGTGAGGTGAAGCTTATAAGTAATGTTCATCATCGAAATCTCATTCGACTTCTAGGATATTGTAGCCATGGCTGTAGCAGAATACTTGTTTATGAATACATGAAAAACAAGAGTCTTGACTATTTTTTATTTGGCTTGGAAACTATATGA 1302 0.4462 MLHTHLLPLLTLVLTWSCWILDGVVSDSQANILKPIACTPFNQFVVSNITIFEENKNATLRDIRDQISDQNKLFVTAQQGAFGNPAVSTLFQCRNYLPVADCVACFDVAAPDILSCPAGAPGAHVAYDGCFLRYDVVSTFFDDTTDTISTASCGNQTITEEPTTFTSSVQQVLKNLQTVTPTTTSFFAATKMKVPNNNNGPTTIFAIAQCTETLTQSTCESCLSSGSNNMQICLPNSEGRAIADGCFMRYSTTSFFPDNYQTSDITPSFKQGSSNIGVIIGGVVGGVALVSLILLVLFCLTKRPKRNKEVPRGEIIGARKLKGPGNYSYRELMSATKNFSEENKLGEGGFGVVYKGVLKNGKVVAVKKLTLRHLHSNKVEEEFESEVKLISNVHHRNLIRLLGYCSHGCSRILVYEYMKNKSLDYFLFGLETI 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2399 433 ProSiteProfiles Gnk2-homologous domain profile. 146 255 IPR002902 -
Prci2g2399 433 Gene3D Phosphorylase Kinase; domain 1 303 417 - -
Prci2g2399 433 FunFam Cysteine-rich receptor-like protein kinase 2 304 417 - -
Prci2g2399 433 Pfam Protein kinase domain 340 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2399 433 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 91 429 - -
Prci2g2399 433 Gene3D - 36 138 IPR038408 -
Prci2g2399 433 Gene3D - 145 255 IPR038408 -
Prci2g2399 433 ProSitePatterns Protein kinases ATP-binding region signature. 345 368 IPR017441 GO:0005524
Prci2g2399 433 FunFam Cysteine-rich receptor-like protein kinase 2 148 255 - -
Prci2g2399 433 ProSiteProfiles Protein kinase domain profile. 339 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2399 433 Pfam Salt stress response/antifungal 153 252 IPR002902 -
Prci2g2399 433 Pfam Salt stress response/antifungal 49 135 IPR002902 -
Prci2g2399 433 SUPERFAMILY Protein kinase-like (PK-like) 323 431 IPR011009 -
Prci2g2399 433 ProSiteProfiles Gnk2-homologous domain profile. 33 139 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2399 Prci-Chr2 19119249 19127063 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2399 83 428 Receptor kinase-like Gene Family AT1G70530 36.080 1.53e-55 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2399 Stress-antifung 1.2e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2399 - - pcin:129302253 795.038