Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2392 ATGAATTCAGGGTCATTGGTTTCCTTTTCTTCAAACTCTGTATCAAGAGAAGATAGAGTGGCTAGTGCCAGAACCAGGTCTTCTCATAACTCAAGGCCTTCCTTTTTGATTCGGATGGCCATGAGGATATCAAGAGCAAGATGGTTCACCTTCTTAAGAAGAGTTTTTCATTACCAAAATGGATCAAGGTCTGATCTTGGATCCAATCCTTTTAATTCTAGCACATGGATGACACTAGAGTTGATTGCTTTGATGGTTCAGATAACCCTCACATCCTTCATTTTGGCCATTTCTAAGAGTGAGAGGCCTGTTTGGCCCATGAGGATATGGATTTCTGGCTATGATATTGGCTGTTTGCTCAATCTGTTGCTACTTTATGGACGCTATCGTCAGCTTTATCTGTCTCATGGAGATGCTCTTAGCCTCTCAGACATGGAACAACAGAGAGGCAATGAAGAAACCAGGTGTTCCCATTTGATGAACAAATGCAGGACTTCACTCGAGCTTTTCTTCGCGATATGGTTTGTGATGGGCAATGTTTGGGTTTTTGACTCACGTTTTGGGTCATTCCAAAGAGCTCCAAAGCTGCACGTGCTCTGCATCTCCTTGCTTGCTTGGAATGCCATCACCTACTCTTTCCCTTTCCTTCTCTTCCTCCTTCTGTGCTGCTGTGTGCCTCTGATCAGCAGCCTCCTTGGTTACAACATGAACATGGCATCTTCTGATAAGGGAGCTTCTGATGATCAAATCTCACAGCTCCCAAGTTGGAGATACAAGCAAGGTCATAACAAGTTGGAGCATGGCCATGATTCTGAAGCCAGTGAAGGGCTGATCAATGAAGATCCTGAATGTTGCATTTGCTTAACCAAATACAAGGACAGAGAAGAAGTGAGGCAATTACCATGTTCTCATATGTTTCACCAAAAATGTGTGGATCAATGGCTGAGAATCATATCTTGTTGCCCTCTATGCAAACAAGGATTACAGAGATAG 993 0.433 MNSGSLVSFSSNSVSREDRVASARTRSSHNSRPSFLIRMAMRISRARWFTFLRRVFHYQNGSRSDLGSNPFNSSTWMTLELIALMVQITLTSFILAISKSERPVWPMRIWISGYDIGCLLNLLLLYGRYRQLYLSHGDALSLSDMEQQRGNEETRCSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPKLHVLCISLLAWNAITYSFPFLLFLLLCCCVPLISSLLGYNMNMASSDKGASDDQISQLPSWRYKQGHNKLEHGHDSEASEGLINEDPECCICLTKYKDREEVRQLPCSHMFHQKCVDQWLRIISCCPLCKQGLQR 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2392 330 SMART ring_2 284 324 IPR001841 -
Prci2g2392 330 SUPERFAMILY RING/U-box 275 328 - -
Prci2g2392 330 ProSiteProfiles Zinc finger RING-type profile. 284 325 IPR001841 -
Prci2g2392 330 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 19 328 - -
Prci2g2392 330 Pfam Ring finger domain 283 325 IPR001841 -
Prci2g2392 330 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 233 329 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2392 Prci-Chr2 18997039 19001106 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2392 3 328 C3H Transcription Factor Family AT4G26580 66.964 2.04e-154 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2392 - - gmx:100813670 539.65