Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2391 ATGAATTCAGGGTCATTGGTTTCCTTTTCTTCAAACTCTGTATCAAGAGAAGATAGAGTGGCTAGTGCCAGAACCAGGTCTTCTCATAACTCAAGGCCTTCCTTTTTGATTCGGATGGCCATGAGGATATCAAGAGCAAGATGGTTCACCTTCTTAAGAAGAGTTTTTCATTACCAAAATGGATCAAGGTCTGATCTTGGATCCAATCCTTTTAATTCTAGCACATGGATGACACTAGAGTTGATTGCTTTGATGGTTCAGATAACCCTCACATCCTTCATTTTGGCCATTTCTAAGAGTGAGAGGCCTGTTTGGCCCATGAGGATATGGATTTCTGGCTATGATATTGGCTGTTTGCTCAATCTGTTGCTACTTTATGGACGCTATCGTCAGCTTTATCTGTCTCATGGAGATGCTCTTAGCCTCTCAGACATGGAACAACAGAGAGGCAATGAAGAAACCAGGACTTCACTCGAGCTTTTCTTCGCGATATGGTTTGTGATGGGCAATGTTTGGGTTTTTGACTCACGTTTTGGGTCATTCCAAAGAGCTCCAAAGCTGCACGTGCTCTGCATCTCCTTGCTTGCTTGGAATGCCATCACCTACTCTTTCCCTTTCCTTCTCTTCCTCCTTCTGTGCTGCTGTGTGCCTCTGATCAGCAGCCTCCTTGGTTACAACATGAACATGGCATCTTCTGATAAGGGAGCTTCTGATGATCAAATCTCACAGCTCCCAAGTTGGAGATACAAGCAAGGTCATAACAAGTTGGAGCATGGCCATGATTCTGAAGCCAGTGAAGGGCTGATCAATGAAGATCCTGAATGTTGCATTTGCTTAACCAAATACAAGGACAGAGAAGAAGTGAGGCAATTACCATGTTCTCATATGTTTCACCAAAAATGTGTGGATCAATGGCTGAGAATCATATCTTGTTGCCCTCTATGCAAACAAGGATTACAGAGATAG 966 0.4337 MNSGSLVSFSSNSVSREDRVASARTRSSHNSRPSFLIRMAMRISRARWFTFLRRVFHYQNGSRSDLGSNPFNSSTWMTLELIALMVQITLTSFILAISKSERPVWPMRIWISGYDIGCLLNLLLLYGRYRQLYLSHGDALSLSDMEQQRGNEETRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPKLHVLCISLLAWNAITYSFPFLLFLLLCCCVPLISSLLGYNMNMASSDKGASDDQISQLPSWRYKQGHNKLEHGHDSEASEGLINEDPECCICLTKYKDREEVRQLPCSHMFHQKCVDQWLRIISCCPLCKQGLQR 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2391 321 SMART ring_2 275 315 IPR001841 -
Prci2g2391 321 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 19 319 - -
Prci2g2391 321 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 224 320 IPR013083 -
Prci2g2391 321 SUPERFAMILY RING/U-box 266 319 - -
Prci2g2391 321 ProSiteProfiles Zinc finger RING-type profile. 275 316 IPR001841 -
Prci2g2391 321 Pfam Ring finger domain 274 316 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2391 Prci-Chr2 18997039 19001108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2391 3 319 C3H Transcription Factor Family AT4G26580 64.881 3.26e-145 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2391 - - gmx:100813670 514.612