Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2385 ATGGCGGCTTTGTGTGAAAGCTTTAGCAGCGGCTATCATGCCTCATACTCATGTTCTGATGATGTTAACAGTTCTTCAACTATGACTTGTGAAGCAAGTGAAGAACAAGAACAAGCTACAAGGACTGAATTGAAAGGGAAGAGTGATATTGAAAGTCTTGAGTTGCCTGATTTCTATGCTCTGAGAAATGTGTCTTCAACAATGATATTTAGTAGCTCCATTTCTAGCACCACCACCTCTTCTGATTCCTCATCCTGTGATAATAATGAAATATCTGATCAACCCAATGGTAACAGAAACCAGCAGGCCAAGTGGAAGAGAGGAAAACTTCTAGGACATGGAGGATTTGGCCGTGTCTACAAGGGATTTAATAGTGAAACCGGACAAATATGCGCAACAAAACGAGTTCTCTTTGATCTTGATGATGAGCGATCAGAAAGGTGCCTTCAACAACTTTGCAAGGAGAGAGCTATACTTTCTCAACGATCACATCCCAATGTCCTTGAATACTATGGAAGCCAAATGGGAAAAGAAGGGTTTTCAATTTTTATGGAGTATGTATCTTATGGTTCAATTTCCAGCATACTTCAAAAATATGGTTCGCTTGAAGAACATCATATTCGACATTTTACCAAGCAAATAGTCAATGGACTTGCCTATTTGCACGATCAAAATATAGTACACAGAGATATCAAAGGAGCCAACAAACTAGTTAGTCCTAATCGTGAGATTAAATTGGCTGATTTTGGAATGGCAAGACATGTAGAATCTTCTTCCTTGATGTATTCTATGAAGGGAAGCTTATATTGGATGGCACCTGAGATGGTAAACAATAAAATTGGATGTACTATGGCTGTGGATATATGGAGCTTGGGATGTACAATTCTAGAAATGGCAACCGGAAGGCCCCCATGGAGTCAATATAAAAAAAGGGTATTGGCAAAAATTGATAATAGTAAAGATCTACCTGCGATTCCAAGTCATCTTTCAGGTGAAGCAAAGGCTTTAATAAGATGTTGCTTACAAAGAGATCCAATGGTTCGTCCAACGGCTCGTCGTTTACTTGATCATCCATTTATTAGAGGATACTAG 1092 0.3901 MAALCESFSSGYHASYSCSDDVNSSSTMTCEASEEQEQATRTELKGKSDIESLELPDFYALRNVSSTMIFSSSISSTTTSSDSSSCDNNEISDQPNGNRNQQAKWKRGKLLGHGGFGRVYKGFNSETGQICATKRVLFDLDDERSERCLQQLCKERAILSQRSHPNVLEYYGSQMGKEGFSIFMEYVSYGSISSILQKYGSLEEHHIRHFTKQIVNGLAYLHDQNIVHRDIKGANKLVSPNREIKLADFGMARHVESSSLMYSMKGSLYWMAPEMVNNKIGCTMAVDIWSLGCTILEMATGRPPWSQYKKRVLAKIDNSKDLPAIPSHLSGEAKALIRCCLQRDPMVRPTARRLLDHPFIRGY 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2385 363 SMART serkin_6 105 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2385 363 Pfam Protein kinase domain 106 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2385 363 MobiDBLite consensus disorder prediction 28 47 - -
Prci2g2385 363 Gene3D Transferase(Phosphotransferase) domain 1 101 363 - -
Prci2g2385 363 ProSiteProfiles Protein kinase domain profile. 105 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2385 363 MobiDBLite consensus disorder prediction 76 103 - -
Prci2g2385 363 PIRSF TyrPK_CSF1-R 102 123 - -
Prci2g2385 363 PIRSF TyrPK_CSF1-R 163 357 - -
Prci2g2385 363 PIRSF TyrPK_CSF1-R 11 74 - -
Prci2g2385 363 SUPERFAMILY Protein kinase-like (PK-like) 100 362 IPR011009 -
Prci2g2385 363 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 42 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2385 Prci-Chr2 18964899 18969429 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2385 105 361 MAP Kinase Kinase Kinase AT1G53570 60.465 1.27e-111 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Prci2g2385 Pkinase 9.3e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2385 K04421 - gmx:100813122 339.347