Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2378 ATGCCGCAAGAGAGCAACGGTAACTCATTCTTCACGTCGCCTTCAAAGAGAGGATTGAAAGCATTAGTCTCTAACTCTATCAGTAACGAGGCTTCATTCGTCGTCACTGAGGAGATCATCAACGATCGGGAATTAGCTCAGAGGAAAGCAGAGGAAGCAGCTTCAAGGAGGTATAAAGCAGCAGAATGGCTACGCGAGATGGACCATGTTGCGTCGGCATCTCTCTCCAAAGAGCCCTCTGAAGAAGAGTTCTGCCTTGCATTACGGAATGGCCTCATTCTCTGCAACGTCCTCAACAAAGTCAACCCCGGGGCTGTTCTCAAGGTGGTGGACAATGCTACTCTTGCGGTTCAATCTGCAGAAGGAGCGGCTCAGTCTGCCATTCAGTATTTCGAGAATATGAGAAATTTTCTGGAGGCAGTCAAGGATATGAAGCTATTGACGTTTGAAGCATCGGATTTAGAAAAGGGAGGTTCAATGAGTAAAGTTGTGGATTGCATTCTGTGTTTGAAAGGATATTATGAATGGAAGCTAGCTGGTGGAGTTGGGGAATGGAGGTATGGAGGAACTGTGAGGATTATTTCATTTCCAAAAGGGTCTTCTTCCTCTATAACTGGTAGTGAAGGAACTGATGAATCCCTGGATGAGTCTGAGTCATCACAATATGAACAACTACTAGAATTTCTCCATCTATCTAGTGAGATCTCGATTGAAGAAACTAGAACTTTCAATGCATTGGCATTCCTATTTGATCACTTTGGACTCAGACTCCTTCAAGCTTACGTCAGAGAGACGGATGGGATTGAAGATCTGCCTATGAATTCAATGGTAATTGATGCATTGCTCGCCAAGGTAGTCAAAGATTTCTCATCGTTGCTTGTTTCTCAACGCAATCAGCTTGGTTTTTTCTTGAAGAAAATATTGAAAGGTGATATTGGTTGCCTATCAAAAACAGAGTTCATAGAAGCTATCTCATTATATCTCAACCAAAGAAGTAGTTTGGCGTCCAAAGATTTTTCAAAATTCTGCATTTGTGGAGGAAAACTTGACCGCACTCGGAAGGAGAGTAATTATTCTTTTAACCATGCTGAAATAGTTAATGAGCAACAGAAACAACTTGAGGGGATGAAATACCTTTTTGAAGAGACAAAGATGGAGGTCAAACAAATTCAATCAGAGTGGGAGCAAGAATTGGGCAGGCTTGATCATCATATTAAGAGCCTAGAAGTGGCAGCCTCTTCCTACCACAAAGTCTTAGAGGAGAATCGTCAACTCTACAATCAAGTACAAGACCTGAAAGGAACTATTAGGGTCTACTGTAGAGTGAGACCCTTCTTACCAGGACAATCAAATGTAAAGTCAACAGTAGATTATATAGGAGAAGGTGGAAATATCATGATTGTTAACCCCCTTAAGCAGGGCAAAGATGCAAGAAGAGTGTTTCAATTCAATAAGGTCTTTGCAACAAATGTCACACAAGAACAAATATATGCTGACACGCAACCACTGGTCAGGTCTGTTTTAGATGGTTATAATGTATGCATCTTTGCATATGGACAAACTGGCTCTGGGAAGACCTACACAATGAGTGGCCCAGATTTAACGACGGAAGAGACATGGGGAGTAAATTATAGAGCGTTGCGTGACTTATTCCAGATATCAAAGGAAAGGTTGAATGCTATAAAATATGATGTTGGCGTACAGATGATTGAAATATACAATGAACAAGTGAGAGATTTATTAGTTAGTGATGGCTCTAATAGAAGATATCCTTTTACTACTTCCTTAACAAGGTTTACATTAGATATACGAAACAACTCTCAATTGAATGGCCTTAATGTGCCTGATGCATGTTTAGTTCCAGTTAATTGTACTGAAGATGTTCTTGATTTGATGAGGATTGGTCAGAAGAATCGTGCAGTGGGTGCTACCGCTCTAAATGAGCGAAGCAGCCGTTCTCATTGCATTTTGACAATTCATGTTCGAGGAAGAGAGCTAGTTTCCAACTCCATTCTTAAAGGTTGTCTCCATCTCGTTGATTTGGCTGGAAGCGAAAGGGTTGACAAATCTGAGGCTGTTGGAGAAAGACTGAAGGAAGCGCAACATATAAATCGATCTCTATCTGCACTGGGAGATGTTATATCTGCCTTGGCACAAAAAAGTCCACATATTCCTTACAGGAATAGCAAGCTCACACAAGTACTACAAGATTCTTTAGGTGGGCATGCCAAAACTTTGATGTTTGTTCATATAAATCCTGAACAAAATGCTCTTGGGGAGACAATTAGCACGCTCAAGTTTGCTGAGAGGGTGGCATCCATTGAACTTGGCGCTGCCCAGTCTCATAAGGAAACTGGTGAAATTAAAGAGCTCAAAGAAGTGATATCGAACCTCAAGTTGGCATTGGAGAGGAAGGAGGCTGAACTGGAGCAATGGAGAGCTGGGAATGCTCGAAACATTGTAGAATCTCAGAAACCAAGGGCAGTTTCCCCTTTTCGCCTTCCCAAAATCGGAGTCAATGCCAGTGTGAAGTCGGAATCTTGCCAGCGACTGACTGATGATAAAATTTCTGAAGCTAGAAGTTGTTCTTCAGGAAAGCAAAGAAGGTCAAGATATCCCTCATCATTCATGGACAAAGAGTCCATTCCAAGAATGCCTCATCTGCCTGAAGAAAAAATAGCAAACTCAGGGAAAGGAAGATCACCATCTCCTCCTATCAGGAGATCAATATCCACAGATAGAGGCTCTGTCATTAAAAGCAAGGTCAGAACTGACACAGCAGATAACCAGCCAATATTGAAACATCCATTTCCAGCTCGAGTACCGGTAAACAAATCTATTTCCCCATTGCCTATGGCCACAAGCACTGACATTAACTCGAGGGTGAATATGAGTTTTCATGAGCTGGTGAAACAAGATAACATTTCTGAAGCTCTCTTCAACCTCCAGAAGGTCAGCTCCAGGAAAGTTCATCATGAACAAGAAGAGGAACAATTTAAACAAGCACTAACTGCAGTAAGACAAGGAGGTATAAGAAAGAGCAAAGCTGAGGGGAAGGCCAAGGCCAAGCATCAGCATCCCCAGCAACTTCCTTTTAGGATTCAAAAATCTGATCTGATACCTGTGCCGATCCCTGACATGGACCTTGCTGATGAAAAGGCATTGGAGGCACCTAGAAAGAGTGATTACTCCGAGCCGGAAAATGATCTTGGCTTAATTGATTCCCCAGTCCATGCTGCACTAAACCTTAAGAAGATACGTCAAAATTTCCCAAGAAATTCTCAGAACCTTAAACCCAGAGGAACACTCCAAGCAGGGGAACCTTTATTGGCTAGCAAGGTTGAGAACAAACTGGTAAATGGTTCTGGCAGAAATCTCAAGGAAGGAAGCAATACATCCATGCCTGAATTTGGAAGAAGCAGATCAACCCCTCGTGGAAAATTCCTTTCATCTTGA 3456 0.4216 MPQESNGNSFFTSPSKRGLKALVSNSISNEASFVVTEEIINDRELAQRKAEEAASRRYKAAEWLREMDHVASASLSKEPSEEEFCLALRNGLILCNVLNKVNPGAVLKVVDNATLAVQSAEGAAQSAIQYFENMRNFLEAVKDMKLLTFEASDLEKGGSMSKVVDCILCLKGYYEWKLAGGVGEWRYGGTVRIISFPKGSSSSITGSEGTDESLDESESSQYEQLLEFLHLSSEISIEETRTFNALAFLFDHFGLRLLQAYVRETDGIEDLPMNSMVIDALLAKVVKDFSSLLVSQRNQLGFFLKKILKGDIGCLSKTEFIEAISLYLNQRSSLASKDFSKFCICGGKLDRTRKESNYSFNHAEIVNEQQKQLEGMKYLFEETKMEVKQIQSEWEQELGRLDHHIKSLEVAASSYHKVLEENRQLYNQVQDLKGTIRVYCRVRPFLPGQSNVKSTVDYIGEGGNIMIVNPLKQGKDARRVFQFNKVFATNVTQEQIYADTQPLVRSVLDGYNVCIFAYGQTGSGKTYTMSGPDLTTEETWGVNYRALRDLFQISKERLNAIKYDVGVQMIEIYNEQVRDLLVSDGSNRRYPFTTSLTRFTLDIRNNSQLNGLNVPDACLVPVNCTEDVLDLMRIGQKNRAVGATALNERSSRSHCILTIHVRGRELVSNSILKGCLHLVDLAGSERVDKSEAVGERLKEAQHINRSLSALGDVISALAQKSPHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEQNALGETISTLKFAERVASIELGAAQSHKETGEIKELKEVISNLKLALERKEAELEQWRAGNARNIVESQKPRAVSPFRLPKIGVNASVKSESCQRLTDDKISEARSCSSGKQRRSRYPSSFMDKESIPRMPHLPEEKIANSGKGRSPSPPIRRSISTDRGSVIKSKVRTDTADNQPILKHPFPARVPVNKSISPLPMATSTDINSRVNMSFHELVKQDNISEALFNLQKVSSRKVHHEQEEEQFKQALTAVRQGGIRKSKAEGKAKAKHQHPQQLPFRIQKSDLIPVPIPDMDLADEKALEAPRKSDYSEPENDLGLIDSPVHAALNLKKIRQNFPRNSQNLKPRGTLQAGEPLLASKVENKLVNGSGRNLKEGSNTSMPEFGRSRSTPRGKFLSS 1151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2378 1151 Gene3D - 46 175 IPR036872 -
Prci2g2378 1151 PRINTS Kinesin heavy chain signature 510 531 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci2g2378 1151 PRINTS Kinesin heavy chain signature 644 661 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci2g2378 1151 PRINTS Kinesin heavy chain signature 675 693 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci2g2378 1151 PRINTS Kinesin heavy chain signature 724 745 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci2g2378 1151 MobiDBLite consensus disorder prediction 1118 1151 - -
Prci2g2378 1151 Coils Coil 788 815 - -
Prci2g2378 1151 PANTHER KINESIN-LIKE PROTEIN KLP-3 61 982 IPR027640 GO:0003777|GO:0007018
Prci2g2378 1151 ProSiteProfiles Calponin homology (CH) domain profile. 54 175 IPR001715 GO:0005515
Prci2g2378 1151 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 436 811 IPR027417 -
Prci2g2378 1151 ProSiteProfiles Kinesin motor domain profile. 435 774 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci2g2378 1151 FunFam kinesin-like protein KIN-14F 46 175 - -
Prci2g2378 1151 Pfam Calponin homology (CH) domain 56 175 IPR001715 GO:0005515
Prci2g2378 1151 FunFam kinesin-like protein KIN-14F 430 815 - -
Prci2g2378 1151 SMART kinesin_4 433 782 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci2g2378 1151 MobiDBLite consensus disorder prediction 1123 1151 - -
Prci2g2378 1151 MobiDBLite consensus disorder prediction 905 927 - -
Prci2g2378 1151 SUPERFAMILY Calponin-homology domain, CH-domain 48 198 IPR036872 -
Prci2g2378 1151 Pfam Kinesin motor domain 441 774 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci2g2378 1151 MobiDBLite consensus disorder prediction 852 937 - -
Prci2g2378 1151 CDD CH_AtKIN14-like 56 171 - -
Prci2g2378 1151 SMART ch_5 56 173 IPR001715 GO:0005515
Prci2g2378 1151 Gene3D Kinesin motor domain 377 776 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2378 Prci-Chr2 18886567 18900354 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2378 423 799 Calmodulin-binding Proteins AT5G65930 40.314 2.61e-75 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2378 K10406 - gmx:100793458 1741.47