Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2376 ATGGCTACTAAATCTGTCGTAGATTTAATAGAGTCATCCTCTGGGGTTCATTTTTCTGGATTTCACATGGATGCATTGGAGAAAATAAATGCTGGGACAGAGCCACCAACAACTTCAGTAGCTGAACACATGTATAATCAACCATTTGTGATAGGTGTTGCTGGTGGAGCAGCAGCTGGGAAAACTGAAGTTTGTAATATGATTATTCAGCAACTTCATGACCAACGAGTTGTAGTTGTTAATCAGGATTCTTTCTATCATAATTTGACGGAAGAAGAACTTACTAGAGTACAAGATTACAACTTTGATCATCCTGATGCTTTTGATACTGAGCAATTGCTAGGAGTTATGGACAAATTGAAGCATGGACAAGCTGTAGATATTCAAATTTATGATTTCAAGAGTTATAAAAGGGATTCATCTCCATCTAGACGGGTAAACCCTTCTGATGTAATAATTTTGGAAGGAATTCTTATTTTTCATGATCCACGCGTTCGGGAGTTGATGAATATGAAGATATTTGTTGACACAGATGCTGATGTTCGACTGGCTAGGAGGATCAAGCGTGATACAGTTCAGAAGGGTCGGGATATTGGTACTGTGCTTGATCAGTATTCTAAATTTGTCAAGCCAGCTTTTGATGACTTTATTCTTCCAACAAAGAAGTATGCTGATATCATTATACCCCGTGGAGGAGACAATCATGTGGCAATTGATTTAATTGTACAGCATATCCGCACAAAGCTTGGTCAGCATGACCTGTGTAAAATATATCCTAACCTTTATGTGATACACTCAACTTTTCAGATACGGGGTATGCATACCCTGATACGTGATTCTCAGATAAAAACACATGATTTTGTATTTTATGCTGACCGTTTGATTCGTCTGGTTGTTGAGCATGGCCTGGGACATCTACCATTTACAGAAAAGCAAGTAATCACTCCGACTGGGTCTGTATACACTGGTGTTGATTTCTGTAAGAGGTTGTGTGGAGTCTCAGTCGTCAGAAGTGGGGAGAGTATGGAGAATGCTTTACGAGCATGCTGCAAAGGTATCAAGATTGGCAAAATTCTTATTCATAGAGAAGGGGAAGGGGACAACAGTCAGCAGCTGATATATGAAAAATTGCCGAATGATATCTCAGATAGGCATGTGTTACTGTTGGATCCCATCCTAGGCACAGGAAATTCGGCTGTACAAGCAATTTCTTTACTTATAAAAAAGGGTGTACCAGAGTCTAACATCATATTTCTCAATCTCATATCGGCACCCCAAGGCGTGCATGTGGTCTGCAAAGCCTTTCCCAGAATAAAAATCGTGACATCTGAGATTGAGTTGGGCCTGAATAAGGACTTCCGTGTCGTACCAGGCATGGGCGAGTTTGGGGACCGGTATTTCGGCACAGATGATGATCAGCAGGTGGTGGTCCCTTCACAGTAG 1443 0.4089 MATKSVVDLIESSSGVHFSGFHMDALEKINAGTEPPTTSVAEHMYNQPFVIGVAGGAAAGKTEVCNMIIQQLHDQRVVVVNQDSFYHNLTEEELTRVQDYNFDHPDAFDTEQLLGVMDKLKHGQAVDIQIYDFKSYKRDSSPSRRVNPSDVIILEGILIFHDPRVRELMNMKIFVDTDADVRLARRIKRDTVQKGRDIGTVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIHSTFQIRGMHTLIRDSQIKTHDFVFYADRLIRLVVEHGLGHLPFTEKQVITPTGSVYTGVDFCKRLCGVSVVRSGESMENALRACCKGIKIGKILIHREGEGDNSQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLIKKGVPESNIIFLNLISAPQGVHVVCKAFPRIKIVTSEIELGLNKDFRVVPGMGEFGDRYFGTDDDQQVVVPSQ 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2376 480 Gene3D - 45 251 IPR027417 -
Prci2g2376 480 Pfam Phosphoribulokinase / Uridine kinase family 50 236 IPR006083 GO:0005524|GO:0016301
Prci2g2376 480 Gene3D - 252 469 IPR029057 -
Prci2g2376 480 NCBIfam uridine kinase 47 248 IPR000764 -
Prci2g2376 480 Pfam Uracil phosphoribosyltransferase 266 469 - -
Prci2g2376 480 PRINTS Uridine kinase signature 180 190 - -
Prci2g2376 480 PRINTS Uridine kinase signature 78 89 - -
Prci2g2376 480 PRINTS Uridine kinase signature 216 229 - -
Prci2g2376 480 PRINTS Uridine kinase signature 123 138 - -
Prci2g2376 480 PRINTS Uridine kinase signature 48 65 - -
Prci2g2376 480 PRINTS Uridine kinase signature 194 205 - -
Prci2g2376 480 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 241 IPR027417 -
Prci2g2376 480 SUPERFAMILY PRTase-like 251 470 IPR029057 -
Prci2g2376 480 CDD PRTases_typeI 325 442 IPR000836 -
Prci2g2376 480 FunFam Uridine kinase 252 469 - -
Prci2g2376 480 CDD UMPK 61 248 IPR000764 -
Prci2g2376 480 FunFam Uridine kinase 45 251 - -
Prci2g2376 480 PANTHER URIDINE KINASE 44 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2376 Prci-Chr2 18853610 18862362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2376 1 472 PRT Gene Family AT4G26510 82.875 0.0 802
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2376 K00876 - qsa:O6P43_021350 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g0935 8 6221527 6228789 Prci2g2376 2 18853610 18862362 CCT
Prci2g2376 2 18853610 18862362 Prci2g2376 2 18853610 18862362 ECH