Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2362 ATGAGCGATTCAGCGTACAGGGTTGAAACAACCTCTCGTCTTGCCCAATGGAGAATCGACAACTTGGCTTCATGTACTTACCGCAAGTCTGATCCTTTCAAGATCGGCATGTGGAACTGGCACTTGATTCTGGAGAAGGACCGGGGTTTGTTCATTAGGTTATACCCAGAACTGACCAATCTTTCTAGAGAAAAACCACCCATTGTATCTCTAATCTTAAGGGTTGTTAGTTCTTCGGGAGATCGCAAGGCCCTGACTCATTCAGAAATAAAAGACAAACTGATTAAGCCCAGTGAAGACTATGTTTGGGCAATTGAGGTCCCACTAACTGGAAAGTTCATTATTGACGTTGAGTTCCTGGATTTAAAGACGGCGTCCCCCAAGGATGAACCTTGCTCCATCTGGGATGATGATATTATGCAGAAAACCTCAAATGCAGCAGCCCTTCAATCACTAGGTCGAATGCTAGCAGAACACATCCACACAGACATCATGATAAATGCTTCAGATGGAAGCATCCAGGGCCATCGTGCTGTTCTTGCCGCTAGATCACCTGTCTTCAGCAGTATGTTCTCATACAATCTTAAGGAGAAAGAGCTATCTGCCATAGACATCCCAGACATGTCAGTTGAAGATTGCCAAGCCTTTCTCAATTATCTTTATGGGATCATCAAGCATGAAGAATTTCTGACACATCGGCAAGTCCTTCTGCATGCAGCTGATAAGTATGATGTATCTGACTTGAAAGAGGCATGCCATCAGAGTCTTCTCAGAGATATAGATTCAAAAAATGTACTTGAGAGACTCCAAAATGCATCTTTATATGAATTGCCGGAATTGAAGATGAGCTGTATGAAATATCTCGTGAAATTTGGTAAATTATATGACATTCGTGATGATTTCAAAGAATTCGTGCAATATGCAGACAGGGATCTGATTGCTGAAATCTTCAATGAAATTATCACTTCCTGGAAAGGATTCTAA 984 0.4187 MSDSAYRVETTSRLAQWRIDNLASCTYRKSDPFKIGMWNWHLILEKDRGLFIRLYPELTNLSREKPPIVSLILRVVSSSGDRKALTHSEIKDKLIKPSEDYVWAIEVPLTGKFIIDVEFLDLKTASPKDEPCSIWDDDIMQKTSNAAALQSLGRMLAEHIHTDIMINASDGSIQGHRAVLAARSPVFSSMFSYNLKEKELSAIDIPDMSVEDCQAFLNYLYGIIKHEEFLTHRQVLLHAADKYDVSDLKEACHQSLLRDIDSKNVLERLQNASLYELPELKMSCMKYLVKFGKLYDIRDDFKEFVQYADRDLIAEIFNEIITSWKGF 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2362 327 ProSiteProfiles BTB domain profile. 162 221 IPR000210 GO:0005515
Prci2g2362 327 SUPERFAMILY POZ domain 147 258 IPR011333 -
Prci2g2362 327 PANTHER OS08G0495500 PROTEIN-RELATED 5 326 IPR044714 -
Prci2g2362 327 SMART BTB_4 162 260 IPR000210 GO:0005515
Prci2g2362 327 Pfam BTB/POZ domain 156 257 IPR000210 GO:0005515
Prci2g2362 327 CDD BTB_POZ_ZBTB_KLHL-like 161 243 - -
Prci2g2362 327 Gene3D Potassium Channel Kv1.1; Chain A 137 290 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2362 Prci-Chr2 18616196 18618507 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Prci2g2362 BTB 5.5e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2362 K10523 - gmx:100790186 513.842