Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2340 ATGTCCCTAACCCTCAACCTCCCCCTTCCCGCCGGCCAATCACTCCGTTCTTCCTCATACCCCGCCGCATCCCTCAGATTTCTCCGGCGTCTACCTGTAAAGTCCTCAAAGAAGTGCAGAGCTTCGATCGGCGCTGTTGCGACGGAGGCCGATCCGGCGGTGATCGATTCCCGGCGGTCATTGAGTCTATACGAGGTGCTCCGAGTCAACCAGAATGCGTCTCCGACGGAAATCAAGTCGGCGTATAGGAGTTTGGCCAAGCTTTACCACCCTGATTCCGCCGTGCGCCGATCGGAATCCGACGGAAGGGACTTCATCGCGATCCACAACGCCTATGAGACGCTCTCCGATCCATCGGCTAGGGCACTGTATGATCTCTCGTTGAAGGCCGCTCGCCGTAGAAGGCGTCCAAATCTGTCGTCGGTGCGAGATCGCTCTTCCGGGTTCTATACGACCCGAAGATGGGAAACGGATCAATGCTGGTAG 486 0.5761 MSLTLNLPLPAGQSLRSSSYPAASLRFLRRLPVKSSKKCRASIGAVATEADPAVIDSRRSLSLYEVLRVNQNASPTEIKSAYRSLAKLYHPDSAVRRSESDGRDFIAIHNAYETLSDPSARALYDLSLKAARRRRRPNLSSVRDRSSGFYTTRRWETDQCW 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2340 161 Gene3D DnaJ domain 51 146 IPR036869 -
Prci2g2340 161 PRINTS DnaJ domain signature 64 82 IPR001623 -
Prci2g2340 161 PRINTS DnaJ domain signature 100 120 IPR001623 -
Prci2g2340 161 PRINTS DnaJ domain signature 82 97 IPR001623 -
Prci2g2340 161 Pfam DnaJ domain 63 125 IPR001623 -
Prci2g2340 161 SMART dnaj_3 61 120 IPR001623 -
Prci2g2340 161 ProSitePatterns Nt-dnaJ domain signature. 105 124 IPR018253 -
Prci2g2340 161 CDD DnaJ 64 117 IPR001623 -
Prci2g2340 161 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 10 161 - -
Prci2g2340 161 ProSiteProfiles dnaJ domain profile. 62 128 IPR001623 -
Prci2g2340 161 SUPERFAMILY Chaperone J-domain 60 131 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2340 Prci-Chr2 18539265 18540050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2340 64 125 C2H2 Transcription Factor Family AT1G74250 45.455 1.27e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2340 - - qsa:O6P43_013446 167.933