Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2309 ATGCCTCAGTTATCTTTCAAGCGTATATATGGCCAACGAGAACAAGTTCCTGGTGCTCTTATCATCGATGGTGGTTCTGGCTATTGCAAATTTGGTTGGAGCAAATATGACCGACCATCTGGGCGATCGGCTACCTTTCTGGAATTTGGTAACCTTGAGTTGCCAATGTACACTAGACTTAGACATTTTTTTGCAACCATTTATAGCAGGATGCAGGTTAAACCAAGTACTCAACCCGTCATTGTTTCTATTCCAATATGCCATTATGATGATACAGAATCTTCCAAAGCATCAAGACGGCAGCTTAAGGAGGCAATATGTGCTTCCCTCTTTGACATGAATGTTCCCGCTATTTGTGCTGTCAACCAGGCCACTTTGGCTCTGTATGCCGCAAAACAAACTTCTGGAATAGCTGTTAATGTTGGTTTTCAGGTCACATCTATAGTCCCAATTATGAATGGTAAAGTTATGCGCAAGGTGGGTGTGGAAGTTGTGGGACTTGGAGCAATCAAACTTACAGGTTTCCTTAGGGAGCTGATGCAACGGAACAACATTAATTTTGAATCTTTGTACACCGTTCGCACACTAAAAGAGAAGCTGTGCTATGTAGCTATTGATTATGAAGCTGAACTATCAAAAGATACACAAGCATCGTTTGAAGCAGCAGGGGAAGGATTGTTTACACTTTCAAAAGAGCGGTTTCAAACAGGAGAGATCCTGTTCCAGCCCCGTCTTGCTGGACTGCAAGCAATGGGTTTGCACCAGGCTGTAGCTCTTTGTATGGACCATTGCCATTCTGCAGAATTAGCAGGTGACCCTGATTGGTTTAAGACTGTGGTTTTATCAGGGGGAACAGCATGCTTACCAGGTCTGGCAGAAAGGTTAGATAAGGAACTCCATGAGTTATTACCTCCCCAGTTGTCCAGTGGAATCAAAGTCATTCCTCCTCCATATGGTGCTGATACTGCATGGTTCGGAGCAAGGACTATTGGCAATTTGAGTACCTTTCCTGGTCCTTGGTGTATAAAGAAGAAGCACTTCCATAAGTCTCGACTCAATCTCATATGGTGA 1071 0.436 MPQLSFKRIYGQREQVPGALIIDGGSGYCKFGWSKYDRPSGRSATFLEFGNLELPMYTRLRHFFATIYSRMQVKPSTQPVIVSIPICHYDDTESSKASRRQLKEAICASLFDMNVPAICAVNQATLALYAAKQTSGIAVNVGFQVTSIVPIMNGKVMRKVGVEVVGLGAIKLTGFLRELMQRNNINFESLYTVRTLKEKLCYVAIDYEAELSKDTQASFEAAGEGLFTLSKERFQTGEILFQPRLAGLQAMGLHQAVALCMDHCHSAELAGDPDWFKTVVLSGGTACLPGLAERLDKELHELLPPQLSSGIKVIPPPYGADTAWFGARTIGNLSTFPGPWCIKKKHFHKSRLNLIW 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2309 356 Gene3D Actin; Chain A, domain 4 167 250 - -
Prci2g2309 356 SUPERFAMILY Actin-like ATPase domain 18 139 IPR043129 -
Prci2g2309 356 Gene3D - 124 322 - -
Prci2g2309 356 PANTHER ACTIN 65 348 IPR004000 -
Prci2g2309 356 Pfam Actin 66 344 IPR004000 -
Prci2g2309 356 SUPERFAMILY Actin-like ATPase domain 134 345 IPR043129 -
Prci2g2309 356 CDD NBD_sugar-kinase_HSP70_actin 20 164 - -
Prci2g2309 356 Gene3D - 63 348 - -
Prci2g2309 356 SMART actin_3 17 347 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2309 Prci-Chr2 18254746 18265233 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2309 66 346 Cytoskeleton Gene Families AT3G12110 31.379 1.75e-41 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2309 K16616 - qsa:O6P43_013433 619.002